Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Gm21759-201ENSMUST00000178345 1828 ntBASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Gm6024-201ENSMUST00000117850 1558 ntBASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Gm25053-201ENSMUST00000103982 133 ntBASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Gm25922-201ENSMUST00000104281 130 ntBASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Gm9133-201ENSMUST00000118289 540 ntBASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Gm12791-201ENSMUST00000120788 655 ntBASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Gm22846-201ENSMUST00000157706 270 ntBASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Gm24679-201ENSMUST00000158762 111 ntBASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Gm5342-201ENSMUST00000181982 1003 ntBASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Gm42660-201ENSMUST00000197733 947 ntBASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Gm25053-202ENSMUST00000199731 132 ntBASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Gm43002-201ENSMUST00000200310 155 ntBASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 AC122024.3-201ENSMUST00000217719 294 ntBASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Lect2-202ENSMUST00000225183 823 ntBASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh8Q7TSK3 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdh8Q7TSK3 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdh8Q7TSK3 Gm37648-201ENSMUST00000192072 2563 ntBASIC10.96□□□□□ -0.66
Pcdh8Q7TSK3 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
Pcdh8Q7TSK3 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdh8Q7TSK3 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
Pcdh8Q7TSK3 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdh8Q7TSK3 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdh8Q7TSK3 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Gm24791-201ENSMUST00000104284 131 ntBASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Gm12179-201ENSMUST00000118344 1272 ntBASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Mir1905-201ENSMUST00000122779 82 ntBASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Gm22146-201ENSMUST00000157397 288 ntBASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Gm25830-201ENSMUST00000158923 132 ntBASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Gm26982-201ENSMUST00000182250 1151 ntBASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 AC122891.1-201ENSMUST00000218671 268 ntBASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Gm7959-201ENSMUST00000221823 1078 ntBASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh8Q7TSK3 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms