Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Gm21939-201ENSMUST00000221137 2773 ntBASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Gm15625-201ENSMUST00000117617 1093 ntBASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Gm14650-201ENSMUST00000120400 889 ntBASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Gm14639-201ENSMUST00000120850 866 ntBASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Gm18443-201ENSMUST00000185358 556 ntBASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Gm7904-201ENSMUST00000217049 465 ntBASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Gstm6-204ENSMUST00000106684 1179 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Gm8968-201ENSMUST00000199133 1303 ntBASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Gm45308-201ENSMUST00000210610 415 ntBASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 AC154436.1-201ENSMUST00000227272 782 ntBASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Chd4Q6PDQ2 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd4Q6PDQ2 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd4Q6PDQ2 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd4Q6PDQ2 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Chd4Q6PDQ2 Gm38034-201ENSMUST00000193915 2069 ntBASIC14.18□□□□□ -0.14
Chd4Q6PDQ2 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chd4Q6PDQ2 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd4Q6PDQ2 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd4Q6PDQ2 Galntl5-202ENSMUST00000114965 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd4Q6PDQ2 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC14.18□□□□□ -0.14
Chd4Q6PDQ2 Gm6713-201ENSMUST00000216137 1446 ntBASIC14.18□□□□□ -0.14
Chd4Q6PDQ2 Gm4865-201ENSMUST00000196284 1309 ntBASIC14.18□□□□□ -0.14
Chd4Q6PDQ2 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Chd4Q6PDQ2 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd4Q6PDQ2 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC14.18□□□□□ -0.14
Chd4Q6PDQ2 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC14.18□□□□□ -0.14
Chd4Q6PDQ2 Gm22876-201ENSMUST00000175450 298 ntBASIC14.18□□□□□ -0.14
Chd4Q6PDQ2 Gm37858-201ENSMUST00000192759 1231 ntBASIC14.18□□□□□ -0.14
Chd4Q6PDQ2 Gm5543-201ENSMUST00000193329 1091 ntBASIC14.18□□□□□ -0.14
Chd4Q6PDQ2 Gm44304-201ENSMUST00000200509 145 ntBASIC14.18□□□□□ -0.14
Chd4Q6PDQ2 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Chd4Q6PDQ2 AC132384.2-201ENSMUST00000218018 526 ntBASIC14.18□□□□□ -0.14
Chd4Q6PDQ2 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd4Q6PDQ2 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Chd4Q6PDQ2 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd4Q6PDQ2 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chd4Q6PDQ2 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
Chd4Q6PDQ2 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd4Q6PDQ2 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd4Q6PDQ2 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd4Q6PDQ2 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd4Q6PDQ2 Gm43052-201ENSMUST00000201451 1628 ntBASIC14.18□□□□□ -0.14
Chd4Q6PDQ2 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd4Q6PDQ2 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms