Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Gm12407-201ENSMUST00000180219 324 ntBASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Gm7504-201ENSMUST00000201449 424 ntBASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Gm45186-201ENSMUST00000206874 478 ntBASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 CT030182.1-201ENSMUST00000225935 533 ntBASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Gm44153-201ENSMUST00000204162 1580 ntBASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 AC154528.2-201ENSMUST00000228432 3023 ntBASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 Gm8731-201ENSMUST00000118088 412 ntBASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 Gm12266-201ENSMUST00000120311 962 ntBASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 Gm15566-201ENSMUST00000121130 590 ntBASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 Gm7741-201ENSMUST00000181445 989 ntBASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 Gm5733-201ENSMUST00000190232 939 ntBASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smarcd3Q6P9Z1 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Smarcd3Q6P9Z1 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC10.15□□□□□ -0.79
Smarcd3Q6P9Z1 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Smarcd3Q6P9Z1 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.15□□□□□ -0.79
Smarcd3Q6P9Z1 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Smarcd3Q6P9Z1 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Smarcd3Q6P9Z1 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.15□□□□□ -0.79
Smarcd3Q6P9Z1 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Smarcd3Q6P9Z1 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smarcd3Q6P9Z1 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC10.14□□□□□ -0.79
Smarcd3Q6P9Z1 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Smarcd3Q6P9Z1 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smarcd3Q6P9Z1 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC10.14□□□□□ -0.79
Smarcd3Q6P9Z1 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Smarcd3Q6P9Z1 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smarcd3Q6P9Z1 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Smarcd3Q6P9Z1 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smarcd3Q6P9Z1 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Smarcd3Q6P9Z1 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smarcd3Q6P9Z1 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Smarcd3Q6P9Z1 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Smarcd3Q6P9Z1 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smarcd3Q6P9Z1 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smarcd3Q6P9Z1 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smarcd3Q6P9Z1 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smarcd3Q6P9Z1 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Smarcd3Q6P9Z1 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smarcd3Q6P9Z1 Snord17-201ENSMUST00000104526 238 ntBASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms