Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Gm15432-201ENSMUST00000121106 195 ntBASIC12.58□□□□□ -0.4
Gm28047Q3US59 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28047Q3US59 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28047Q3US59 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28047Q3US59 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Gm28047Q3US59 Gm37466-201ENSMUST00000195692 652 ntBASIC12.58□□□□□ -0.4
Gm28047Q3US59 Igkv2-116-201ENSMUST00000199327 362 ntBASIC12.58□□□□□ -0.4
Gm28047Q3US59 Gm43916-201ENSMUST00000205062 967 ntBASIC12.58□□□□□ -0.4
Gm28047Q3US59 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.58□□□□□ -0.4
Gm28047Q3US59 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.58□□□□□ -0.4
Gm28047Q3US59 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC12.58□□□□□ -0.4
Gm28047Q3US59 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.58□□□□□ -0.4
Gm28047Q3US59 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
Gm28047Q3US59 Gm6768-201ENSMUST00000022467 1878 ntBASIC12.58□□□□□ -0.4
Gm28047Q3US59 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28047Q3US59 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Gm28047Q3US59 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28047Q3US59 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28047Q3US59 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28047Q3US59 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28047Q3US59 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28047Q3US59 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28047Q3US59 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Gm28047Q3US59 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28047Q3US59 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28047Q3US59 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28047Q3US59 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.58□□□□□ -0.4
Gm28047Q3US59 AA474408-201ENSMUST00000098110 3339 ntBASIC12.58□□□□□ -0.4
Gm28047Q3US59 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28047Q3US59 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28047Q3US59 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28047Q3US59 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28047Q3US59 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28047Q3US59 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28047Q3US59 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.57□□□□□ -0.4
Gm28047Q3US59 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.57□□□□□ -0.4
Gm28047Q3US59 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28047Q3US59 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28047Q3US59 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28047Q3US59 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28047Q3US59 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.57□□□□□ -0.4
Gm28047Q3US59 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.57□□□□□ -0.4
Gm28047Q3US59 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28047Q3US59 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28047Q3US59 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28047Q3US59 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28047Q3US59 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.57□□□□□ -0.4
Gm28047Q3US59 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28047Q3US59 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28047Q3US59 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.57□□□□□ -0.4
Gm28047Q3US59 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.57□□□□□ -0.4
Gm28047Q3US59 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.57□□□□□ -0.4
Gm28047Q3US59 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.57□□□□□ -0.4
Gm28047Q3US59 Gm26461-201ENSMUST00000175064 290 ntBASIC12.57□□□□□ -0.4
Gm28047Q3US59 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.57□□□□□ -0.4
Gm28047Q3US59 Gm7255-201ENSMUST00000187371 908 ntBASIC12.57□□□□□ -0.4
Gm28047Q3US59 Gm3551-201ENSMUST00000190750 664 ntBASIC12.57□□□□□ -0.4
Gm28047Q3US59 Gm37458-201ENSMUST00000194055 410 ntBASIC12.57□□□□□ -0.4
Gm28047Q3US59 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.57□□□□□ -0.4
Gm28047Q3US59 Gm5599-201ENSMUST00000209602 788 ntBASIC12.57□□□□□ -0.4
Gm28047Q3US59 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.57□□□□□ -0.4
Gm28047Q3US59 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.57□□□□□ -0.4
Gm28047Q3US59 AC154436.1-201ENSMUST00000227272 782 ntBASIC12.57□□□□□ -0.4
Gm28047Q3US59 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28047Q3US59 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.57□□□□□ -0.4
Gm28047Q3US59 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Gm28047Q3US59 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28047Q3US59 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Gm28047Q3US59 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Gm28047Q3US59 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Gm28047Q3US59 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28047Q3US59 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28047Q3US59 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28047Q3US59 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC12.57□□□□□ -0.4
Gm28047Q3US59 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28047Q3US59 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28047Q3US59 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.57□□□□□ -0.4
Gm28047Q3US59 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28047Q3US59 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28047Q3US59 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28047Q3US59 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28047Q3US59 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28047Q3US59 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28047Q3US59 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.56□□□□□ -0.4
Gm28047Q3US59 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28047Q3US59 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28047Q3US59 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28047Q3US59 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28047Q3US59 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28047Q3US59 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28047Q3US59 Gm42851-201ENSMUST00000201325 1411 ntBASIC12.56□□□□□ -0.4
Gm28047Q3US59 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC12.56□□□□□ -0.4
Gm28047Q3US59 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC12.56□□□□□ -0.4
Gm28047Q3US59 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Gm28047Q3US59 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28047Q3US59 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28047Q3US59 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC12.56□□□□□ -0.4
Gm28047Q3US59 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.56□□□□□ -0.4
Gm28047Q3US59 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC12.56□□□□□ -0.4
Gm28047Q3US59 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms