Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 2010008C14Rik-201ENSMUST00000203956 593 ntBASIC13.02□□□□□ -0.33
Col5a2Q3U962 Gm8557-201ENSMUST00000220777 475 ntBASIC13.02□□□□□ -0.33
Col5a2Q3U962 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col5a2Q3U962 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Col5a2Q3U962 Gm10617-201ENSMUST00000098368 1172 ntBASIC13.02□□□□□ -0.33
Col5a2Q3U962 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col5a2Q3U962 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Col5a2Q3U962 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.02□□□□□ -0.33
Col5a2Q3U962 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col5a2Q3U962 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Col5a2Q3U962 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col5a2Q3U962 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col5a2Q3U962 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col5a2Q3U962 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col5a2Q3U962 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col5a2Q3U962 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a2Q3U962 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Col5a2Q3U962 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a2Q3U962 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a2Q3U962 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Col5a2Q3U962 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a2Q3U962 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a2Q3U962 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a2Q3U962 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Col5a2Q3U962 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Col5a2Q3U962 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a2Q3U962 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a2Q3U962 Matn2-203ENSMUST00000226766 3252 ntBASIC13.01□□□□□ -0.33
Col5a2Q3U962 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a2Q3U962 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a2Q3U962 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a2Q3U962 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC13.01□□□□□ -0.33
Col5a2Q3U962 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC13.01□□□□□ -0.33
Col5a2Q3U962 Gm16480-201ENSMUST00000120439 832 ntBASIC13.01□□□□□ -0.33
Col5a2Q3U962 Gm6517-201ENSMUST00000121056 511 ntBASIC13.01□□□□□ -0.33
Col5a2Q3U962 Gm12950-201ENSMUST00000121683 417 ntBASIC13.01□□□□□ -0.33
Col5a2Q3U962 Gm38313-201ENSMUST00000191953 1266 ntBASIC13.01□□□□□ -0.33
Col5a2Q3U962 Gm42908-201ENSMUST00000197508 870 ntBASIC13.01□□□□□ -0.33
Col5a2Q3U962 Rassf6-205ENSMUST00000202704 1178 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Col5a2Q3U962 AC102569.1-201ENSMUST00000221563 685 ntBASIC13.01□□□□□ -0.33
Col5a2Q3U962 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC13.01□□□□□ -0.33
Col5a2Q3U962 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Col5a2Q3U962 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a2Q3U962 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a2Q3U962 Gm3283-201ENSMUST00000199319 1350 ntBASIC13.01□□□□□ -0.33
Col5a2Q3U962 AC109214.1-201ENSMUST00000219520 1372 ntBASIC13.01□□□□□ -0.33
Col5a2Q3U962 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a2Q3U962 Hat1-201ENSMUST00000028408 1576 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a2Q3U962 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a2Q3U962 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a2Q3U962 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a2Q3U962 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a2Q3U962 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a2Q3U962 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC13.01□□□□□ -0.33
Col5a2Q3U962 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a2Q3U962 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Col5a2Q3U962 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col5a2Q3U962 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Col5a2Q3U962 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col5a2Q3U962 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Col5a2Q3U962 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col5a2Q3U962 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Col5a2Q3U962 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col5a2Q3U962 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col5a2Q3U962 Gm42833-201ENSMUST00000196019 2124 ntBASIC13□□□□□ -0.33
Col5a2Q3U962 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Col5a2Q3U962 AC116596.1-201ENSMUST00000228112 1762 ntBASIC13□□□□□ -0.33
Col5a2Q3U962 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col5a2Q3U962 Gm10537-201ENSMUST00000192625 1698 ntBASIC13□□□□□ -0.33
Col5a2Q3U962 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col5a2Q3U962 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC13□□□□□ -0.33
Col5a2Q3U962 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC13□□□□□ -0.33
Col5a2Q3U962 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col5a2Q3U962 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13□□□□□ -0.33
Col5a2Q3U962 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC13□□□□□ -0.33
Col5a2Q3U962 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC13□□□□□ -0.33
Col5a2Q3U962 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col5a2Q3U962 D430040D24Rik-201ENSMUST00000149224 910 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col5a2Q3U962 Gm22662-201ENSMUST00000175290 256 ntBASIC13□□□□□ -0.33
Col5a2Q3U962 Gm28032-201ENSMUST00000184104 96 ntBASIC13□□□□□ -0.33
Col5a2Q3U962 Gm18443-201ENSMUST00000185358 556 ntBASIC13□□□□□ -0.33
Col5a2Q3U962 Gm7539-201ENSMUST00000189789 630 ntBASIC13□□□□□ -0.33
Col5a2Q3U962 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col5a2Q3U962 Gm45308-201ENSMUST00000210610 415 ntBASIC13□□□□□ -0.33
Col5a2Q3U962 Saa-ps-201ENSMUST00000211148 320 ntBASIC13□□□□□ -0.33
Col5a2Q3U962 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col5a2Q3U962 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC13□□□□□ -0.33
Col5a2Q3U962 AC174647.1-201ENSMUST00000227419 1271 ntBASIC13□□□□□ -0.33
Col5a2Q3U962 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col5a2Q3U962 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col5a2Q3U962 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
Col5a2Q3U962 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col5a2Q3U962 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13□□□□□ -0.33
Col5a2Q3U962 Klf10-203ENSMUST00000227920 2144 ntBASIC13□□□□□ -0.33
Col5a2Q3U962 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col5a2Q3U962 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13□□□□□ -0.33
Col5a2Q3U962 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col5a2Q3U962 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Col5a2Q3U962 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col5a2Q3U962 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms