Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm5264-201ENSMUST00000190584 848 ntBASIC9.05□□□□□ -0.96
Trim63Q38HM4 Gm32999-201ENSMUST00000192693 562 ntBASIC9.05□□□□□ -0.96
Trim63Q38HM4 CT009754.4-201ENSMUST00000221430 565 ntBASIC9.05□□□□□ -0.96
Trim63Q38HM4 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim63Q38HM4 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim63Q38HM4 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC9.05□□□□□ -0.96
Trim63Q38HM4 n-R5s77-201ENSMUST00000083757 119 ntBASIC9.05□□□□□ -0.96
Trim63Q38HM4 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Pklr-202ENSMUST00000107482 2902 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Fnbp1-201ENSMUST00000073879 8469 ntTSL 5 BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Zfx-203ENSMUST00000113926 6762 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim63Q38HM4 AC122293.1-201ENSMUST00000218333 2231 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Rars-201ENSMUST00000018992 2109 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Gm42833-201ENSMUST00000196019 2124 ntBASIC9.05□□□□□ -0.96
Trim63Q38HM4 Gm36401-201ENSMUST00000194255 2028 ntBASIC9.05□□□□□ -0.96
Trim63Q38HM4 Gm20705-201ENSMUST00000177278 1921 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Gm12436-201ENSMUST00000131099 2959 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Gm37737-201ENSMUST00000195013 1638 ntBASIC9.05□□□□□ -0.96
Trim63Q38HM4 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Rnase6-202ENSMUST00000226194 2452 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Pde1c-204ENSMUST00000164752 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Nrxn3-205ENSMUST00000163134 7922 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim63Q38HM4 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Slc12a5-209ENSMUST00000202623 3574 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Ik-201ENSMUST00000007042 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Sorbs1-211ENSMUST00000224667 4313 ntAPPRIS ALT2 BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Acaca-201ENSMUST00000020843 9026 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Olfr1276-203ENSMUST00000218065 5052 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Anxa7-207ENSMUST00000224975 2727 ntAPPRIS P2 BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Gm45847-201ENSMUST00000209402 1880 ntTSL 3 BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Nvl-201ENSMUST00000027797 9392 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Phka2-201ENSMUST00000033652 4133 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Itga7-201ENSMUST00000099112 4013 ntAPPRIS P2 TSL 2 BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Tmem63a-205ENSMUST00000161523 3258 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Sncaip-203ENSMUST00000163742 3272 ntAPPRIS P3 TSL 5 BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Dync1i1-201ENSMUST00000115554 2518 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Fam149b-210ENSMUST00000224721 4483 ntAPPRIS ALT2 BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Ctnna2-201ENSMUST00000075340 2864 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Exoc5-207ENSMUST00000162175 12699 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Tdp1-207ENSMUST00000153627 2036 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim63Q38HM4 4930552P12Rik-201ENSMUST00000181198 2496 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Rbm19-201ENSMUST00000031590 4010 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Mgme1-201ENSMUST00000028910 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Gm23061-201ENSMUST00000102348 116 ntBASIC9.04□□□□□ -0.96
Trim63Q38HM4 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Gm11964-201ENSMUST00000120982 444 ntBASIC9.04□□□□□ -0.96
Trim63Q38HM4 Gm16342-201ENSMUST00000124025 1025 ntBASIC9.04□□□□□ -0.96
Trim63Q38HM4 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Gm5279-201ENSMUST00000199575 745 ntBASIC9.04□□□□□ -0.96
Trim63Q38HM4 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC9.04□□□□□ -0.96
Trim63Q38HM4 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trim63Q38HM4 AC155258.1-201ENSMUST00000219303 253 ntBASIC9.04□□□□□ -0.96
Trim63Q38HM4 Gm5781-201ENSMUST00000219792 443 ntBASIC9.04□□□□□ -0.96
Trim63Q38HM4 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim63Q38HM4 AC160929.1-201ENSMUST00000221247 415 ntBASIC9.04□□□□□ -0.96
Trim63Q38HM4 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Trim63Q38HM4 AC192088.1-201ENSMUST00000227561 301 ntBASIC9.04□□□□□ -0.96
Trim63Q38HM4 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Dpp4-201ENSMUST00000047812 5268 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Tmem170b-201ENSMUST00000129449 7168 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Tpm1-213ENSMUST00000113697 1742 ntTSL 2 BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Zscan21-203ENSMUST00000110959 2964 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Gtpbp8-204ENSMUST00000162512 3415 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim63Q38HM4 2310043P16Rik-201ENSMUST00000205403 3881 ntBASIC9.04□□□□□ -0.96
Trim63Q38HM4 Olfr1219-205ENSMUST00000217421 5849 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Nup133-201ENSMUST00000044795 5808 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Plscr4-201ENSMUST00000034941 3204 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Olfr63-203ENSMUST00000217023 7023 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Sele-201ENSMUST00000027874 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Pkd2l2-202ENSMUST00000166156 2132 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC9.04□□□□□ -0.96
Trim63Q38HM4 Gm5159-201ENSMUST00000212733 1652 ntBASIC9.04□□□□□ -0.96
Trim63Q38HM4 Col12a1-201ENSMUST00000071750 11511 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms