Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC8.6□□□□□ -1.03
Cdx4Q07424 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 Gm38140-201ENSMUST00000193617 2755 ntBASIC8.6□□□□□ -1.03
Cdx4Q07424 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC8.6□□□□□ -1.03
Cdx4Q07424 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Cdx4Q07424 Gm13326-201ENSMUST00000118730 1011 ntBASIC8.6□□□□□ -1.03
Cdx4Q07424 Gm11451-201ENSMUST00000118946 630 ntBASIC8.6□□□□□ -1.03
Cdx4Q07424 Gm7150-201ENSMUST00000122032 981 ntBASIC8.6□□□□□ -1.03
Cdx4Q07424 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC8.6□□□□□ -1.03
Cdx4Q07424 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC8.6□□□□□ -1.03
Cdx4Q07424 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 Gm21092-201ENSMUST00000178995 955 ntBASIC8.6□□□□□ -1.03
Cdx4Q07424 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
Cdx4Q07424 Gm9358-201ENSMUST00000183067 927 ntBASIC8.6□□□□□ -1.03
Cdx4Q07424 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC8.6□□□□□ -1.03
Cdx4Q07424 Gm3551-201ENSMUST00000190750 664 ntBASIC8.6□□□□□ -1.03
Cdx4Q07424 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC8.6□□□□□ -1.03
Cdx4Q07424 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC8.6□□□□□ -1.03
Cdx4Q07424 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 Gm8342-201ENSMUST00000209839 757 ntBASIC8.6□□□□□ -1.03
Cdx4Q07424 Gm9661-201ENSMUST00000221611 1122 ntBASIC8.6□□□□□ -1.03
Cdx4Q07424 AC118639.2-201ENSMUST00000226289 223 ntBASIC8.6□□□□□ -1.03
Cdx4Q07424 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 Gm6781-201ENSMUST00000038304 1242 ntBASIC8.6□□□□□ -1.03
Cdx4Q07424 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 Gm6430-201ENSMUST00000054664 1248 ntBASIC8.6□□□□□ -1.03
Cdx4Q07424 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC8.6□□□□□ -1.03
Cdx4Q07424 Mirlet7i-201ENSMUST00000083472 85 ntBASIC8.6□□□□□ -1.03
Cdx4Q07424 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Cdx4Q07424 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC8.6□□□□□ -1.03
Cdx4Q07424 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Cdx4Q07424 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 AC158355.1-201ENSMUST00000215895 1705 ntBASIC8.6□□□□□ -1.03
Cdx4Q07424 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC8.6□□□□□ -1.03
Cdx4Q07424 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC8.6□□□□□ -1.03
Cdx4Q07424 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC8.6□□□□□ -1.03
Cdx4Q07424 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC8.59□□□□□ -1.03
Cdx4Q07424 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Cdx4Q07424 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC8.59□□□□□ -1.03
Cdx4Q07424 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cdx4Q07424 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Cdx4Q07424 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cdx4Q07424 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Cdx4Q07424 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC8.59□□□□□ -1.03
Cdx4Q07424 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cdx4Q07424 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Cdx4Q07424 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Cdx4Q07424 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cdx4Q07424 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Cdx4Q07424 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cdx4Q07424 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Cdx4Q07424 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC8.59□□□□□ -1.03
Cdx4Q07424 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC8.59□□□□□ -1.03
Cdx4Q07424 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Cdx4Q07424 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Cdx4Q07424 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cdx4Q07424 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cdx4Q07424 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cdx4Q07424 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC8.59□□□□□ -1.03
Cdx4Q07424 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC8.59□□□□□ -1.03
Cdx4Q07424 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Cdx4Q07424 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC8.59□□□□□ -1.03
Cdx4Q07424 Gm11949-201ENSMUST00000117640 372 ntBASIC8.59□□□□□ -1.03
Cdx4Q07424 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC8.59□□□□□ -1.03
Cdx4Q07424 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC8.59□□□□□ -1.03
Cdx4Q07424 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cdx4Q07424 Gm5778-201ENSMUST00000171003 1072 ntBASIC8.59□□□□□ -1.03
Cdx4Q07424 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC8.59□□□□□ -1.03
Cdx4Q07424 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC8.59□□□□□ -1.03
Cdx4Q07424 Mir7076-201ENSMUST00000183519 74 ntBASIC8.59□□□□□ -1.03
Cdx4Q07424 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC8.59□□□□□ -1.03
Cdx4Q07424 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Cdx4Q07424 Gm44980-201ENSMUST00000205826 314 ntBASIC8.59□□□□□ -1.03
Cdx4Q07424 Gm7600-201ENSMUST00000209657 785 ntBASIC8.59□□□□□ -1.03
Cdx4Q07424 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC8.59□□□□□ -1.03
Cdx4Q07424 Prrxl1-205ENSMUST00000228878 723 ntBASIC8.59□□□□□ -1.03
Cdx4Q07424 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cdx4Q07424 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cdx4Q07424 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms