Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lig3P97386 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lig3P97386 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Lig3P97386 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lig3P97386 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lig3P97386 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.18□□□□□ -0.46
Lig3P97386 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Lig3P97386 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lig3P97386 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lig3P97386 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Lig3P97386 Gm14892-201ENSMUST00000117636 267 ntBASIC12.18□□□□□ -0.46
Lig3P97386 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lig3P97386 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC12.18□□□□□ -0.46
Lig3P97386 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lig3P97386 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC12.18□□□□□ -0.46
Lig3P97386 Gm37981-201ENSMUST00000194280 535 ntBASIC12.18□□□□□ -0.46
Lig3P97386 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Lig3P97386 Gm5870-201ENSMUST00000196461 282 ntBASIC12.18□□□□□ -0.46
Lig3P97386 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.18□□□□□ -0.46
Lig3P97386 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.18□□□□□ -0.46
Lig3P97386 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC12.18□□□□□ -0.46
Lig3P97386 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Lig3P97386 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Lig3P97386 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lig3P97386 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Lig3P97386 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lig3P97386 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lig3P97386 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lig3P97386 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lig3P97386 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Lig3P97386 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lig3P97386 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lig3P97386 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lig3P97386 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lig3P97386 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lig3P97386 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Lig3P97386 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Lig3P97386 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Lig3P97386 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lig3P97386 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Lig3P97386 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lig3P97386 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Lig3P97386 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lig3P97386 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lig3P97386 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lig3P97386 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lig3P97386 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Lig3P97386 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Lig3P97386 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lig3P97386 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lig3P97386 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lig3P97386 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Lig3P97386 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lig3P97386 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lig3P97386 Gm5641-201ENSMUST00000091130 1488 ntBASIC12.17□□□□□ -0.46
Lig3P97386 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lig3P97386 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lig3P97386 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Lig3P97386 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lig3P97386 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Lig3P97386 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Lig3P97386 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Lig3P97386 Gm23272-201ENSMUST00000104053 129 ntBASIC12.17□□□□□ -0.46
Lig3P97386 Gm12419-201ENSMUST00000116649 636 ntBASIC12.17□□□□□ -0.46
Lig3P97386 Gm6630-201ENSMUST00000119199 454 ntBASIC12.17□□□□□ -0.46
Lig3P97386 Gm5419-201ENSMUST00000119301 527 ntBASIC12.17□□□□□ -0.46
Lig3P97386 Gm7150-201ENSMUST00000122032 981 ntBASIC12.17□□□□□ -0.46
Lig3P97386 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Lig3P97386 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lig3P97386 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lig3P97386 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC12.17□□□□□ -0.46
Lig3P97386 Gm9507-202ENSMUST00000180157 654 ntBASIC12.17□□□□□ -0.46
Lig3P97386 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lig3P97386 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.17□□□□□ -0.46
Lig3P97386 Trav11n-201ENSMUST00000200113 343 ntBASIC12.17□□□□□ -0.46
Lig3P97386 Gm44315-201ENSMUST00000203041 219 ntBASIC12.17□□□□□ -0.46
Lig3P97386 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lig3P97386 Gm5340-201ENSMUST00000203733 880 ntBASIC12.17□□□□□ -0.46
Lig3P97386 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lig3P97386 Gm3433-201ENSMUST00000210149 1058 ntBASIC12.17□□□□□ -0.46
Lig3P97386 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC12.17□□□□□ -0.46
Lig3P97386 Gm2553-201ENSMUST00000215986 605 ntBASIC12.17□□□□□ -0.46
Lig3P97386 Gm16380-201ENSMUST00000077997 478 ntBASIC12.17□□□□□ -0.46
Lig3P97386 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lig3P97386 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.17□□□□□ -0.46
Lig3P97386 Gm42602-201ENSMUST00000200288 3224 ntBASIC12.17□□□□□ -0.46
Lig3P97386 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Lig3P97386 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lig3P97386 Gm43375-201ENSMUST00000196705 2480 ntBASIC12.17□□□□□ -0.46
Lig3P97386 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lig3P97386 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lig3P97386 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lig3P97386 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.17□□□□□ -0.46
Lig3P97386 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Lig3P97386 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lig3P97386 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lig3P97386 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Lig3P97386 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Lig3P97386 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lig3P97386 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms