Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CiitaP79621 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CiitaP79621 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CiitaP79621 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
CiitaP79621 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CiitaP79621 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CiitaP79621 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CiitaP79621 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CiitaP79621 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CiitaP79621 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CiitaP79621 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CiitaP79621 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CiitaP79621 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12□□□□□ -0.49
CiitaP79621 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CiitaP79621 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CiitaP79621 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CiitaP79621 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CiitaP79621 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CiitaP79621 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CiitaP79621 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CiitaP79621 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CiitaP79621 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CiitaP79621 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CiitaP79621 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CiitaP79621 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CiitaP79621 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CiitaP79621 Gm22146-201ENSMUST00000157397 288 ntBASIC12□□□□□ -0.49
CiitaP79621 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC12□□□□□ -0.49
CiitaP79621 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC12□□□□□ -0.49
CiitaP79621 Ighv2-1-201ENSMUST00000170946 353 ntBASIC12□□□□□ -0.49
CiitaP79621 Gm20781-201ENSMUST00000193154 693 ntBASIC12□□□□□ -0.49
CiitaP79621 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC12□□□□□ -0.49
CiitaP79621 Gm6677-201ENSMUST00000195100 441 ntBASIC12□□□□□ -0.49
CiitaP79621 Gm21736-201ENSMUST00000195399 693 ntBASIC12□□□□□ -0.49
CiitaP79621 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC12□□□□□ -0.49
CiitaP79621 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC12□□□□□ -0.49
CiitaP79621 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC12□□□□□ -0.49
CiitaP79621 Gm6390-201ENSMUST00000215034 589 ntBASIC12□□□□□ -0.49
CiitaP79621 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC12□□□□□ -0.49
CiitaP79621 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CiitaP79621 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
CiitaP79621 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CiitaP79621 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CiitaP79621 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12□□□□□ -0.49
CiitaP79621 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CiitaP79621 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CiitaP79621 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CiitaP79621 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CiitaP79621 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC12□□□□□ -0.49
CiitaP79621 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12□□□□□ -0.49
CiitaP79621 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12□□□□□ -0.49
CiitaP79621 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CiitaP79621 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CiitaP79621 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CiitaP79621 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CiitaP79621 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CiitaP79621 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CiitaP79621 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CiitaP79621 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
CiitaP79621 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CiitaP79621 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
CiitaP79621 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CiitaP79621 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CiitaP79621 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CiitaP79621 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CiitaP79621 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC11.99□□□□□ -0.49
CiitaP79621 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CiitaP79621 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC11.99□□□□□ -0.49
CiitaP79621 Gm31274-201ENSMUST00000197356 229 ntBASIC11.99□□□□□ -0.49
CiitaP79621 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC11.99□□□□□ -0.49
CiitaP79621 Gm33080-201ENSMUST00000205429 172 ntBASIC11.99□□□□□ -0.49
CiitaP79621 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
CiitaP79621 Gm3433-201ENSMUST00000210149 1058 ntBASIC11.99□□□□□ -0.49
CiitaP79621 AC164429.1-201ENSMUST00000224210 518 ntBASIC11.99□□□□□ -0.49
CiitaP79621 Gm4604-201ENSMUST00000025040 390 ntBASIC11.99□□□□□ -0.49
CiitaP79621 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
CiitaP79621 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.99□□□□□ -0.49
CiitaP79621 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CiitaP79621 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CiitaP79621 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CiitaP79621 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CiitaP79621 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CiitaP79621 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CiitaP79621 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CiitaP79621 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CiitaP79621 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CiitaP79621 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CiitaP79621 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.99□□□□□ -0.49
CiitaP79621 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CiitaP79621 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CiitaP79621 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CiitaP79621 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CiitaP79621 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CiitaP79621 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CiitaP79621 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CiitaP79621 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CiitaP79621 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CiitaP79621 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
CiitaP79621 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CiitaP79621 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms