Protein–RNA interactions for Protein: P70122

Sbds, Ribosome maturation protein SBDS, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SbdsP70122 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
SbdsP70122 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SbdsP70122 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SbdsP70122 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SbdsP70122 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SbdsP70122 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SbdsP70122 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.56□□□□□ -0.56
SbdsP70122 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.56□□□□□ -0.56
SbdsP70122 Gm16219-201ENSMUST00000120096 274 ntBASIC11.56□□□□□ -0.56
SbdsP70122 Gm15595-201ENSMUST00000120840 961 ntBASIC11.56□□□□□ -0.56
SbdsP70122 Gm14277-201ENSMUST00000121195 360 ntBASIC11.56□□□□□ -0.56
SbdsP70122 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SbdsP70122 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC11.56□□□□□ -0.56
SbdsP70122 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.56□□□□□ -0.56
SbdsP70122 Gm2260-201ENSMUST00000184965 657 ntBASIC11.56□□□□□ -0.56
SbdsP70122 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
SbdsP70122 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SbdsP70122 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SbdsP70122 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.56□□□□□ -0.56
SbdsP70122 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SbdsP70122 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.56□□□□□ -0.56
SbdsP70122 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.56□□□□□ -0.56
SbdsP70122 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SbdsP70122 Gm25125-201ENSMUST00000083340 136 ntBASIC11.56□□□□□ -0.56
SbdsP70122 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC11.56□□□□□ -0.56
SbdsP70122 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SbdsP70122 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SbdsP70122 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
SbdsP70122 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
SbdsP70122 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC11.56□□□□□ -0.56
SbdsP70122 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SbdsP70122 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
SbdsP70122 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SbdsP70122 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SbdsP70122 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SbdsP70122 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SbdsP70122 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SbdsP70122 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SbdsP70122 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
SbdsP70122 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
SbdsP70122 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
SbdsP70122 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC11.55□□□□□ -0.56
SbdsP70122 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
SbdsP70122 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SbdsP70122 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SbdsP70122 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.55□□□□□ -0.56
SbdsP70122 Gm22920-201ENSMUST00000102175 109 ntBASIC11.55□□□□□ -0.56
SbdsP70122 Gm8302-201ENSMUST00000119217 852 ntBASIC11.55□□□□□ -0.56
SbdsP70122 Mir1896-201ENSMUST00000122641 81 ntBASIC11.55□□□□□ -0.56
SbdsP70122 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.55□□□□□ -0.56
SbdsP70122 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SbdsP70122 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
SbdsP70122 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.55□□□□□ -0.56
SbdsP70122 Gm19246-201ENSMUST00000173599 255 ntBASIC11.55□□□□□ -0.56
SbdsP70122 Gm37301-201ENSMUST00000195412 568 ntBASIC11.55□□□□□ -0.56
SbdsP70122 Gm10829-201ENSMUST00000202084 2988 ntBASIC11.55□□□□□ -0.56
SbdsP70122 Gm8574-201ENSMUST00000203207 924 ntBASIC11.55□□□□□ -0.56
SbdsP70122 Gm2517-201ENSMUST00000215651 348 ntBASIC11.55□□□□□ -0.56
SbdsP70122 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.55□□□□□ -0.56
SbdsP70122 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
SbdsP70122 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
SbdsP70122 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
SbdsP70122 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SbdsP70122 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
SbdsP70122 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SbdsP70122 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SbdsP70122 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SbdsP70122 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.55□□□□□ -0.56
SbdsP70122 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SbdsP70122 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SbdsP70122 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SbdsP70122 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SbdsP70122 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SbdsP70122 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SbdsP70122 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.55□□□□□ -0.56
SbdsP70122 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
SbdsP70122 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
SbdsP70122 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SbdsP70122 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SbdsP70122 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SbdsP70122 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SbdsP70122 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SbdsP70122 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SbdsP70122 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
SbdsP70122 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SbdsP70122 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
SbdsP70122 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
SbdsP70122 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.54□□□□□ -0.56
SbdsP70122 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SbdsP70122 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SbdsP70122 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SbdsP70122 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SbdsP70122 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SbdsP70122 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SbdsP70122 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC11.54□□□□□ -0.56
SbdsP70122 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SbdsP70122 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
SbdsP70122 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
SbdsP70122 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
SbdsP70122 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms