Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.26□□□□□ -0.45
Hmgb1P63158 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.26□□□□□ -0.45
Hmgb1P63158 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.26□□□□□ -0.45
Hmgb1P63158 Gm1821-202ENSMUST00000227415 750 ntBASIC12.26□□□□□ -0.45
Hmgb1P63158 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgb1P63158 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgb1P63158 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgb1P63158 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgb1P63158 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.26□□□□□ -0.45
Hmgb1P63158 Entpd5-206ENSMUST00000122194 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgb1P63158 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgb1P63158 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgb1P63158 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.26□□□□□ -0.45
Hmgb1P63158 Fndc9-201ENSMUST00000060185 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgb1P63158 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgb1P63158 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgb1P63158 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgb1P63158 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgb1P63158 Gm43288-201ENSMUST00000197594 2628 ntBASIC12.25□□□□□ -0.45
Hmgb1P63158 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgb1P63158 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgb1P63158 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgb1P63158 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgb1P63158 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgb1P63158 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgb1P63158 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgb1P63158 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Hmgb1P63158 A630009H07Rik-201ENSMUST00000208485 2159 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgb1P63158 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgb1P63158 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgb1P63158 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgb1P63158 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Hmgb1P63158 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Hmgb1P63158 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.25□□□□□ -0.45
Hmgb1P63158 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC12.25□□□□□ -0.45
Hmgb1P63158 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.25□□□□□ -0.45
Hmgb1P63158 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgb1P63158 Gm23694-201ENSMUST00000179335 110 ntBASIC12.25□□□□□ -0.45
Hmgb1P63158 Gm10774-201ENSMUST00000188689 204 ntBASIC12.25□□□□□ -0.45
Hmgb1P63158 Gm37981-201ENSMUST00000194280 535 ntBASIC12.25□□□□□ -0.45
Hmgb1P63158 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgb1P63158 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.25□□□□□ -0.45
Hmgb1P63158 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.25□□□□□ -0.45
Hmgb1P63158 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.25□□□□□ -0.45
Hmgb1P63158 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC12.25□□□□□ -0.45
Hmgb1P63158 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgb1P63158 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Hmgb1P63158 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgb1P63158 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgb1P63158 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Hmgb1P63158 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Hmgb1P63158 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.25□□□□□ -0.45
Hmgb1P63158 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgb1P63158 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.25□□□□□ -0.45
Hmgb1P63158 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgb1P63158 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgb1P63158 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgb1P63158 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgb1P63158 Gm10699-201ENSMUST00000098916 2130 ntBASIC12.25□□□□□ -0.45
Hmgb1P63158 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC12.25□□□□□ -0.45
Hmgb1P63158 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgb1P63158 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgb1P63158 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgb1P63158 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgb1P63158 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgb1P63158 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.24□□□□□ -0.45
Hmgb1P63158 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Hmgb1P63158 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Hmgb1P63158 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC12.24□□□□□ -0.45
Hmgb1P63158 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgb1P63158 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgb1P63158 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgb1P63158 Gm15615-201ENSMUST00000118876 198 ntBASIC12.24□□□□□ -0.45
Hmgb1P63158 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.24□□□□□ -0.45
Hmgb1P63158 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgb1P63158 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC12.24□□□□□ -0.45
Hmgb1P63158 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgb1P63158 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC12.24□□□□□ -0.45
Hmgb1P63158 Gm37597-201ENSMUST00000191853 382 ntBASIC12.24□□□□□ -0.45
Hmgb1P63158 Gm37301-201ENSMUST00000195412 568 ntBASIC12.24□□□□□ -0.45
Hmgb1P63158 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.24□□□□□ -0.45
Hmgb1P63158 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgb1P63158 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgb1P63158 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgb1P63158 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Hmgb1P63158 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Hmgb1P63158 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgb1P63158 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Hmgb1P63158 Mir433-201ENSMUST00000093564 124 ntBASIC12.24□□□□□ -0.45
Hmgb1P63158 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC12.24□□□□□ -0.45
Hmgb1P63158 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgb1P63158 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Hmgb1P63158 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Hmgb1P63158 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgb1P63158 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgb1P63158 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgb1P63158 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgb1P63158 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.24□□□□□ -0.45
Hmgb1P63158 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgb1P63158 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms