Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
NrlP54846 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NrlP54846 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NrlP54846 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NrlP54846 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NrlP54846 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NrlP54846 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NrlP54846 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NrlP54846 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.81□□□□□ -0.52
NrlP54846 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
NrlP54846 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NrlP54846 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NrlP54846 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NrlP54846 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
NrlP54846 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NrlP54846 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
NrlP54846 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NrlP54846 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NrlP54846 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NrlP54846 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.81□□□□□ -0.52
NrlP54846 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
NrlP54846 Gm3828-201ENSMUST00000121817 257 ntBASIC11.81□□□□□ -0.52
NrlP54846 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
NrlP54846 Gm25226-201ENSMUST00000158198 123 ntBASIC11.81□□□□□ -0.52
NrlP54846 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
NrlP54846 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NrlP54846 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NrlP54846 Gm5267-201ENSMUST00000191574 1045 ntBASIC11.81□□□□□ -0.52
NrlP54846 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.81□□□□□ -0.52
NrlP54846 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NrlP54846 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC11.81□□□□□ -0.52
NrlP54846 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NrlP54846 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC11.81□□□□□ -0.52
NrlP54846 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
NrlP54846 Gm5178-201ENSMUST00000219380 898 ntBASIC11.81□□□□□ -0.52
NrlP54846 CT010480.2-201ENSMUST00000225424 737 ntBASIC11.81□□□□□ -0.52
NrlP54846 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NrlP54846 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NrlP54846 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.81□□□□□ -0.52
NrlP54846 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
NrlP54846 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NrlP54846 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NrlP54846 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NrlP54846 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NrlP54846 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
NrlP54846 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NrlP54846 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NrlP54846 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NrlP54846 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
NrlP54846 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NrlP54846 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
NrlP54846 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
NrlP54846 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
NrlP54846 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC11.8□□□□□ -0.52
NrlP54846 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC11.8□□□□□ -0.52
NrlP54846 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NrlP54846 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NrlP54846 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NrlP54846 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.8□□□□□ -0.52
NrlP54846 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.8□□□□□ -0.52
NrlP54846 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC11.8□□□□□ -0.52
NrlP54846 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.8□□□□□ -0.52
NrlP54846 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
NrlP54846 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NrlP54846 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NrlP54846 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
NrlP54846 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC11.8□□□□□ -0.52
NrlP54846 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
NrlP54846 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NrlP54846 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
NrlP54846 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
NrlP54846 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
NrlP54846 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NrlP54846 Gm4917-201ENSMUST00000121452 650 ntBASIC11.8□□□□□ -0.52
NrlP54846 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NrlP54846 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC11.8□□□□□ -0.52
NrlP54846 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC11.8□□□□□ -0.52
NrlP54846 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
NrlP54846 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
NrlP54846 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.8□□□□□ -0.52
NrlP54846 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NrlP54846 Gm31274-201ENSMUST00000197356 229 ntBASIC11.8□□□□□ -0.52
NrlP54846 Gm43966-201ENSMUST00000203301 612 ntBASIC11.8□□□□□ -0.52
NrlP54846 AC158388.3-202ENSMUST00000225517 775 ntBASIC11.8□□□□□ -0.52
NrlP54846 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NrlP54846 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
NrlP54846 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NrlP54846 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NrlP54846 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NrlP54846 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NrlP54846 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
NrlP54846 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
NrlP54846 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NrlP54846 Gm42941-201ENSMUST00000200347 1321 ntBASIC11.8□□□□□ -0.52
NrlP54846 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.8□□□□□ -0.52
NrlP54846 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NrlP54846 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
NrlP54846 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NrlP54846 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NrlP54846 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms