Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
Shmt1P50431 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Shmt1P50431 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Shmt1P50431 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shmt1P50431 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Shmt1P50431 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shmt1P50431 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shmt1P50431 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shmt1P50431 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC11.7□□□□□ -0.54
Shmt1P50431 Gm13600-201ENSMUST00000117949 744 ntBASIC11.7□□□□□ -0.54
Shmt1P50431 AC238811.4-201ENSMUST00000178019 1246 ntBASIC11.7□□□□□ -0.54
Shmt1P50431 AC238940.3-201ENSMUST00000178830 1246 ntBASIC11.7□□□□□ -0.54
Shmt1P50431 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC11.7□□□□□ -0.54
Shmt1P50431 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC11.7□□□□□ -0.54
Shmt1P50431 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.7□□□□□ -0.54
Shmt1P50431 Gm43667-201ENSMUST00000198616 1095 ntBASIC11.7□□□□□ -0.54
Shmt1P50431 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Shmt1P50431 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC11.7□□□□□ -0.54
Shmt1P50431 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC11.7□□□□□ -0.54
Shmt1P50431 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC11.7□□□□□ -0.54
Shmt1P50431 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shmt1P50431 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shmt1P50431 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shmt1P50431 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Shmt1P50431 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shmt1P50431 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shmt1P50431 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Shmt1P50431 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shmt1P50431 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Shmt1P50431 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC11.7□□□□□ -0.54
Shmt1P50431 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Shmt1P50431 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Shmt1P50431 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shmt1P50431 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Shmt1P50431 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shmt1P50431 Gm42815-201ENSMUST00000198787 1470 ntBASIC11.7□□□□□ -0.54
Shmt1P50431 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shmt1P50431 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shmt1P50431 AC124732.3-201ENSMUST00000221835 1765 ntBASIC11.69□□□□□ -0.54
Shmt1P50431 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.69□□□□□ -0.54
Shmt1P50431 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Shmt1P50431 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.69□□□□□ -0.54
Shmt1P50431 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Shmt1P50431 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shmt1P50431 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Shmt1P50431 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shmt1P50431 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC11.69□□□□□ -0.54
Shmt1P50431 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shmt1P50431 Gm6641-201ENSMUST00000196100 1315 ntBASIC11.69□□□□□ -0.54
Shmt1P50431 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC11.69□□□□□ -0.54
Shmt1P50431 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shmt1P50431 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shmt1P50431 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shmt1P50431 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shmt1P50431 Gm25562-201ENSMUST00000104608 133 ntBASIC11.69□□□□□ -0.54
Shmt1P50431 Gm12389-201ENSMUST00000117696 418 ntBASIC11.69□□□□□ -0.54
Shmt1P50431 Gm11801-201ENSMUST00000117807 746 ntBASIC11.69□□□□□ -0.54
Shmt1P50431 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC11.69□□□□□ -0.54
Shmt1P50431 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC11.69□□□□□ -0.54
Shmt1P50431 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC11.69□□□□□ -0.54
Shmt1P50431 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shmt1P50431 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shmt1P50431 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC11.69□□□□□ -0.54
Shmt1P50431 Gm8723-201ENSMUST00000166076 820 ntBASIC11.69□□□□□ -0.54
Shmt1P50431 Gm8701-201ENSMUST00000169259 874 ntBASIC11.69□□□□□ -0.54
Shmt1P50431 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Shmt1P50431 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shmt1P50431 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shmt1P50431 Gm28833-201ENSMUST00000189671 559 ntBASIC11.69□□□□□ -0.54
Shmt1P50431 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Shmt1P50431 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shmt1P50431 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.69□□□□□ -0.54
Shmt1P50431 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC11.69□□□□□ -0.54
Shmt1P50431 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shmt1P50431 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shmt1P50431 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Shmt1P50431 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shmt1P50431 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shmt1P50431 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shmt1P50431 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.69□□□□□ -0.54
Shmt1P50431 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shmt1P50431 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shmt1P50431 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shmt1P50431 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Shmt1P50431 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shmt1P50431 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shmt1P50431 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shmt1P50431 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC11.69□□□□□ -0.54
Shmt1P50431 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shmt1P50431 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shmt1P50431 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Shmt1P50431 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.69□□□□□ -0.54
Shmt1P50431 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shmt1P50431 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shmt1P50431 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt1P50431 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt1P50431 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Shmt1P50431 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt1P50431 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt1P50431 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms