Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
GdnfP48540 AC107638.1-201ENSMUST00000213690 1061 ntBASIC9.8□□□□□ -0.84
GdnfP48540 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
GdnfP48540 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
GdnfP48540 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC9.8□□□□□ -0.84
GdnfP48540 Gm36495-201ENSMUST00000221201 684 ntTSL 5 BASIC9.8□□□□□ -0.84
GdnfP48540 Gm270-201ENSMUST00000223010 976 ntBASIC9.8□□□□□ -0.84
GdnfP48540 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
GdnfP48540 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
GdnfP48540 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
GdnfP48540 Gm26448-201ENSMUST00000082446 203 ntBASIC9.8□□□□□ -0.84
GdnfP48540 Mir433-201ENSMUST00000093564 124 ntBASIC9.8□□□□□ -0.84
GdnfP48540 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
GdnfP48540 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
GdnfP48540 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
GdnfP48540 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
GdnfP48540 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
GdnfP48540 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
GdnfP48540 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
GdnfP48540 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
GdnfP48540 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
GdnfP48540 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
GdnfP48540 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
GdnfP48540 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
GdnfP48540 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
GdnfP48540 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
GdnfP48540 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
GdnfP48540 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
GdnfP48540 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
GdnfP48540 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
GdnfP48540 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
GdnfP48540 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
GdnfP48540 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
GdnfP48540 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
GdnfP48540 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC9.79□□□□□ -0.84
GdnfP48540 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
GdnfP48540 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
GdnfP48540 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
GdnfP48540 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
GdnfP48540 AC091458.1-201ENSMUST00000220902 1361 ntBASIC9.79□□□□□ -0.84
GdnfP48540 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
GdnfP48540 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
GdnfP48540 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
GdnfP48540 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
GdnfP48540 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
GdnfP48540 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
GdnfP48540 Gm23596-201ENSMUST00000104304 132 ntBASIC9.79□□□□□ -0.84
GdnfP48540 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
GdnfP48540 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
GdnfP48540 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC9.79□□□□□ -0.84
GdnfP48540 Gm11660-201ENSMUST00000120955 412 ntBASIC9.79□□□□□ -0.84
GdnfP48540 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
GdnfP48540 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
GdnfP48540 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
GdnfP48540 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
GdnfP48540 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC9.79□□□□□ -0.84
GdnfP48540 Gm3332-201ENSMUST00000189337 928 ntBASIC9.79□□□□□ -0.84
GdnfP48540 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC9.79□□□□□ -0.84
GdnfP48540 Gm18038-201ENSMUST00000197900 485 ntBASIC9.79□□□□□ -0.84
GdnfP48540 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
GdnfP48540 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
GdnfP48540 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC9.79□□□□□ -0.84
GdnfP48540 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC9.79□□□□□ -0.84
GdnfP48540 AC102569.1-201ENSMUST00000221563 685 ntBASIC9.79□□□□□ -0.84
GdnfP48540 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC9.79□□□□□ -0.84
GdnfP48540 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC9.79□□□□□ -0.84
GdnfP48540 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
GdnfP48540 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
GdnfP48540 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
GdnfP48540 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
GdnfP48540 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
GdnfP48540 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
GdnfP48540 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
GdnfP48540 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC9.79□□□□□ -0.84
GdnfP48540 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
GdnfP48540 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
GdnfP48540 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
GdnfP48540 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
GdnfP48540 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
GdnfP48540 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
GdnfP48540 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
GdnfP48540 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
GdnfP48540 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
GdnfP48540 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
GdnfP48540 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
GdnfP48540 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
GdnfP48540 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
GdnfP48540 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
GdnfP48540 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
GdnfP48540 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
GdnfP48540 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
GdnfP48540 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
GdnfP48540 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
GdnfP48540 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
GdnfP48540 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
GdnfP48540 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
GdnfP48540 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
GdnfP48540 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
GdnfP48540 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
GdnfP48540 Gm23200-201ENSMUST00000104379 132 ntBASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms