Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox18P43680 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Sox18P43680 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox18P43680 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sox18P43680 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox18P43680 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.97□□□□□ -0.65
Sox18P43680 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Sox18P43680 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.97□□□□□ -0.65
Sox18P43680 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox18P43680 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox18P43680 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sox18P43680 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Sox18P43680 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox18P43680 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox18P43680 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Sox18P43680 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox18P43680 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Sox18P43680 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox18P43680 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox18P43680 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox18P43680 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Sox18P43680 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox18P43680 Gm23745-201ENSMUST00000104230 125 ntBASIC10.97□□□□□ -0.65
Sox18P43680 Mir453-201ENSMUST00000104732 82 ntBASIC10.97□□□□□ -0.65
Sox18P43680 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Sox18P43680 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC10.97□□□□□ -0.65
Sox18P43680 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox18P43680 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Sox18P43680 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sox18P43680 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC10.97□□□□□ -0.65
Sox18P43680 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Sox18P43680 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sox18P43680 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Sox18P43680 Gm4462-201ENSMUST00000166453 492 ntBASIC10.97□□□□□ -0.65
Sox18P43680 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Sox18P43680 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Sox18P43680 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Sox18P43680 Gm24328-201ENSMUST00000175104 67 ntBASIC10.97□□□□□ -0.65
Sox18P43680 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox18P43680 Gm27390-201ENSMUST00000184516 176 ntBASIC10.97□□□□□ -0.65
Sox18P43680 Gm8384-201ENSMUST00000190905 704 ntBASIC10.97□□□□□ -0.65
Sox18P43680 Gm37858-201ENSMUST00000192759 1231 ntBASIC10.97□□□□□ -0.65
Sox18P43680 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC10.97□□□□□ -0.65
Sox18P43680 Gm21461-201ENSMUST00000200382 863 ntBASIC10.97□□□□□ -0.65
Sox18P43680 Gm45310-201ENSMUST00000210436 275 ntBASIC10.97□□□□□ -0.65
Sox18P43680 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC10.97□□□□□ -0.65
Sox18P43680 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Sox18P43680 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.97□□□□□ -0.65
Sox18P43680 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Sox18P43680 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox18P43680 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox18P43680 AC107763.1-201ENSMUST00000226082 1365 ntBASIC10.97□□□□□ -0.65
Sox18P43680 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox18P43680 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox18P43680 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Sox18P43680 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox18P43680 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sox18P43680 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.97□□□□□ -0.65
Sox18P43680 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox18P43680 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sox18P43680 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox18P43680 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox18P43680 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox18P43680 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox18P43680 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.97□□□□□ -0.65
Sox18P43680 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox18P43680 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox18P43680 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox18P43680 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox18P43680 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox18P43680 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox18P43680 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.96□□□□□ -0.65
Sox18P43680 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox18P43680 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox18P43680 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox18P43680 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox18P43680 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox18P43680 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox18P43680 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.96□□□□□ -0.65
Sox18P43680 AC139754.2-201ENSMUST00000218037 1455 ntBASIC10.96□□□□□ -0.65
Sox18P43680 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox18P43680 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox18P43680 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox18P43680 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.65
Sox18P43680 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox18P43680 Ccl20-202ENSMUST00000113437 794 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox18P43680 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox18P43680 Gm16305-201ENSMUST00000140747 556 ntBASIC10.96□□□□□ -0.65
Sox18P43680 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC10.96□□□□□ -0.65
Sox18P43680 Gm21943-201ENSMUST00000178181 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox18P43680 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Sox18P43680 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox18P43680 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC10.96□□□□□ -0.65
Sox18P43680 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox18P43680 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox18P43680 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.96□□□□□ -0.65
Sox18P43680 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox18P43680 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox18P43680 Ccl20-203ENSMUST00000186832 772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox18P43680 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms