Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-2P42586 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.13□□□□□ -0.79
Nkx2-2P42586 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Gm6641-201ENSMUST00000196100 1315 ntBASIC10.13□□□□□ -0.79
Nkx2-2P42586 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Gm26013-201ENSMUST00000104404 119 ntBASIC10.13□□□□□ -0.79
Nkx2-2P42586 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Gm12516-201ENSMUST00000120819 385 ntBASIC10.13□□□□□ -0.79
Nkx2-2P42586 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC10.13□□□□□ -0.79
Nkx2-2P42586 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC10.13□□□□□ -0.79
Nkx2-2P42586 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC10.13□□□□□ -0.79
Nkx2-2P42586 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC10.13□□□□□ -0.79
Nkx2-2P42586 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-2P42586 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC10.13□□□□□ -0.79
Nkx2-2P42586 Gm42657-201ENSMUST00000201746 211 ntBASIC10.13□□□□□ -0.79
Nkx2-2P42586 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-2P42586 CT025618.1-203ENSMUST00000227008 589 ntBASIC10.13□□□□□ -0.79
Nkx2-2P42586 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Nkx2-2P42586 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-2P42586 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.12□□□□□ -0.79
Nkx2-2P42586 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-2P42586 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-2P42586 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-2P42586 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-2P42586 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-2P42586 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-2P42586 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-2P42586 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-2P42586 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-2P42586 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-2P42586 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Nkx2-2P42586 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Nkx2-2P42586 Gm12274-201ENSMUST00000120062 385 ntBASIC10.12□□□□□ -0.79
Nkx2-2P42586 Gm11952-201ENSMUST00000121172 821 ntBASIC10.12□□□□□ -0.79
Nkx2-2P42586 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC10.12□□□□□ -0.79
Nkx2-2P42586 Mir1896-201ENSMUST00000122641 81 ntBASIC10.12□□□□□ -0.79
Nkx2-2P42586 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-2P42586 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC10.12□□□□□ -0.79
Nkx2-2P42586 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-2P42586 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-2P42586 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-2P42586 Gm26134-201ENSMUST00000178484 110 ntBASIC10.12□□□□□ -0.79
Nkx2-2P42586 Gm5523-201ENSMUST00000180415 997 ntBASIC10.12□□□□□ -0.79
Nkx2-2P42586 Gm42816-201ENSMUST00000198433 325 ntBASIC10.12□□□□□ -0.79
Nkx2-2P42586 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC10.12□□□□□ -0.79
Nkx2-2P42586 Gm44158-201ENSMUST00000203881 505 ntBASIC10.12□□□□□ -0.79
Nkx2-2P42586 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC10.12□□□□□ -0.79
Nkx2-2P42586 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC10.12□□□□□ -0.79
Nkx2-2P42586 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC10.12□□□□□ -0.79
Nkx2-2P42586 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-2P42586 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Nkx2-2P42586 Gm6768-201ENSMUST00000022467 1878 ntBASIC10.12□□□□□ -0.79
Nkx2-2P42586 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-2P42586 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-2P42586 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-2P42586 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-2P42586 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-2P42586 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.12□□□□□ -0.79
Nkx2-2P42586 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms