Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl12P40224 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl12P40224 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl12P40224 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Cxcl12P40224 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC11.42□□□□□ -0.58
Cxcl12P40224 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.42□□□□□ -0.58
Cxcl12P40224 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Cxcl12P40224 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Cxcl12P40224 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl12P40224 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC11.42□□□□□ -0.58
Cxcl12P40224 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC11.42□□□□□ -0.58
Cxcl12P40224 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl12P40224 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl12P40224 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC11.42□□□□□ -0.58
Cxcl12P40224 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl12P40224 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl12P40224 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl12P40224 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl12P40224 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.42□□□□□ -0.58
Cxcl12P40224 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl12P40224 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl12P40224 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl12P40224 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl12P40224 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl12P40224 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl12P40224 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl12P40224 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC11.42□□□□□ -0.58
Cxcl12P40224 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl12P40224 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cxcl12P40224 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC11.42□□□□□ -0.58
Cxcl12P40224 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl12P40224 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl12P40224 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl12P40224 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl12P40224 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl12P40224 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cxcl12P40224 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Cxcl12P40224 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Cxcl12P40224 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl12P40224 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl12P40224 Gm7405-201ENSMUST00000121476 1337 ntBASIC11.41□□□□□ -0.58
Cxcl12P40224 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl12P40224 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cxcl12P40224 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl12P40224 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl12P40224 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl12P40224 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC11.41□□□□□ -0.58
Cxcl12P40224 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl12P40224 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl12P40224 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl12P40224 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Cxcl12P40224 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl12P40224 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl12P40224 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC11.41□□□□□ -0.58
Cxcl12P40224 Gm9574-201ENSMUST00000173127 845 ntBASIC11.41□□□□□ -0.58
Cxcl12P40224 Gm6686-201ENSMUST00000178455 258 ntBASIC11.41□□□□□ -0.58
Cxcl12P40224 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl12P40224 Gm42803-201ENSMUST00000201051 451 ntBASIC11.41□□□□□ -0.58
Cxcl12P40224 Gm44540-201ENSMUST00000205640 354 ntBASIC11.41□□□□□ -0.58
Cxcl12P40224 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl12P40224 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl12P40224 BX649293.1-201ENSMUST00000227437 631 ntBASIC11.41□□□□□ -0.58
Cxcl12P40224 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC11.41□□□□□ -0.58
Cxcl12P40224 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl12P40224 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl12P40224 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl12P40224 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl12P40224 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl12P40224 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl12P40224 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cxcl12P40224 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cxcl12P40224 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl12P40224 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC11.4□□□□□ -0.58
Cxcl12P40224 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl12P40224 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Cxcl12P40224 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl12P40224 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl12P40224 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl12P40224 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl12P40224 Gm14571-201ENSMUST00000118292 570 ntBASIC11.4□□□□□ -0.58
Cxcl12P40224 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Cxcl12P40224 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Cxcl12P40224 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC11.4□□□□□ -0.58
Cxcl12P40224 Mir3091-201ENSMUST00000175086 76 ntBASIC11.4□□□□□ -0.58
Cxcl12P40224 Gm5274-201ENSMUST00000182641 1003 ntBASIC11.4□□□□□ -0.58
Cxcl12P40224 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl12P40224 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC11.4□□□□□ -0.58
Cxcl12P40224 Gm8615-201ENSMUST00000025307 771 ntBASIC11.4□□□□□ -0.58
Cxcl12P40224 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl12P40224 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl12P40224 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl12P40224 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.4□□□□□ -0.58
Cxcl12P40224 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl12P40224 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl12P40224 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Cxcl12P40224 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Cxcl12P40224 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cxcl12P40224 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cxcl12P40224 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Cxcl12P40224 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms