Protein–RNA interactions for Protein: P35822

Ptprk, Receptor-type tyrosine-protein phosphatase kappa, mousemouse

Predictions only

Length 1,457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtprkP35822 Gm16480-201ENSMUST00000120439 832 ntBASIC17.32■□□□□ 0.36
PtprkP35822 Gm6425-201ENSMUST00000136332 790 ntBASIC17.32■□□□□ 0.36
PtprkP35822 Gm24074-201ENSMUST00000158178 260 ntBASIC17.32■□□□□ 0.36
PtprkP35822 Csta1-202ENSMUST00000161638 422 ntTSL 3 BASIC17.32■□□□□ 0.36
PtprkP35822 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PtprkP35822 Mir6396-201ENSMUST00000183603 111 ntBASIC17.32■□□□□ 0.36
PtprkP35822 Gm28180-201ENSMUST00000189608 722 ntBASIC17.32■□□□□ 0.36
PtprkP35822 Gm7539-201ENSMUST00000189789 630 ntBASIC17.32■□□□□ 0.36
PtprkP35822 2010008C14Rik-201ENSMUST00000203956 593 ntBASIC17.32■□□□□ 0.36
PtprkP35822 AC102312.1-202ENSMUST00000218600 851 ntTSL 2 BASIC17.32■□□□□ 0.36
PtprkP35822 Gm5191-201ENSMUST00000222882 1236 ntBASIC17.32■□□□□ 0.36
PtprkP35822 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PtprkP35822 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC17.32■□□□□ 0.36
PtprkP35822 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PtprkP35822 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
PtprkP35822 Gm43984-201ENSMUST00000204572 2864 ntBASIC17.32■□□□□ 0.36
PtprkP35822 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PtprkP35822 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PtprkP35822 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC17.32■□□□□ 0.36
PtprkP35822 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PtprkP35822 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PtprkP35822 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PtprkP35822 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
PtprkP35822 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PtprkP35822 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC17.32■□□□□ 0.36
PtprkP35822 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PtprkP35822 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PtprkP35822 Gm24466-201ENSMUST00000179978 109 ntBASIC17.31■□□□□ 0.36
PtprkP35822 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PtprkP35822 Gm42710-201ENSMUST00000200608 985 ntBASIC17.31■□□□□ 0.36
PtprkP35822 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC17.31■□□□□ 0.36
PtprkP35822 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
PtprkP35822 AC102327.1-201ENSMUST00000226389 742 ntBASIC17.31■□□□□ 0.36
PtprkP35822 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PtprkP35822 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC17.31■□□□□ 0.36
PtprkP35822 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PtprkP35822 Gm37542-201ENSMUST00000192563 2832 ntBASIC17.31■□□□□ 0.36
PtprkP35822 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PtprkP35822 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PtprkP35822 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PtprkP35822 AC124561.1-202ENSMUST00000228652 1929 ntBASIC17.31■□□□□ 0.36
PtprkP35822 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PtprkP35822 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PtprkP35822 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PtprkP35822 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC17.31■□□□□ 0.36
PtprkP35822 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PtprkP35822 AC122860.2-201ENSMUST00000217967 2671 ntBASIC17.31■□□□□ 0.36
PtprkP35822 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PtprkP35822 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PtprkP35822 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PtprkP35822 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PtprkP35822 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PtprkP35822 Gm22751-201ENSMUST00000102077 109 ntBASIC17.31■□□□□ 0.36
PtprkP35822 Mir692-3-201ENSMUST00000102079 109 ntBASIC17.31■□□□□ 0.36
PtprkP35822 Mir692-2-201ENSMUST00000102081 109 ntBASIC17.31■□□□□ 0.36
PtprkP35822 Gm24161-201ENSMUST00000104592 130 ntBASIC17.31■□□□□ 0.36
PtprkP35822 Gm12377-201ENSMUST00000118656 252 ntBASIC17.31■□□□□ 0.36
PtprkP35822 Pvalb-202ENSMUST00000120592 953 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PtprkP35822 Gm16013-201ENSMUST00000152249 353 ntTSL 3 BASIC17.31■□□□□ 0.36
PtprkP35822 Gm25694-201ENSMUST00000175448 282 ntBASIC17.31■□□□□ 0.36
PtprkP35822 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PtprkP35822 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC17.31■□□□□ 0.36
PtprkP35822 Gm8960-201ENSMUST00000219787 788 ntBASIC17.31■□□□□ 0.36
PtprkP35822 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PtprkP35822 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PtprkP35822 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
PtprkP35822 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC17.3■□□□□ 0.36
PtprkP35822 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PtprkP35822 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PtprkP35822 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PtprkP35822 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PtprkP35822 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PtprkP35822 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC17.3■□□□□ 0.36
PtprkP35822 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PtprkP35822 Gm13120-201ENSMUST00000117343 1446 ntBASIC17.3■□□□□ 0.36
PtprkP35822 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
PtprkP35822 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PtprkP35822 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PtprkP35822 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PtprkP35822 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PtprkP35822 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PtprkP35822 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PtprkP35822 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PtprkP35822 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PtprkP35822 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PtprkP35822 Mtcp1-202ENSMUST00000114081 980 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PtprkP35822 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PtprkP35822 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PtprkP35822 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PtprkP35822 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC17.3■□□□□ 0.36
PtprkP35822 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
PtprkP35822 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PtprkP35822 Gm28499-201ENSMUST00000191576 666 ntTSL 2 BASIC17.3■□□□□ 0.36
PtprkP35822 Gm32102-201ENSMUST00000196885 241 ntBASIC17.3■□□□□ 0.36
PtprkP35822 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PtprkP35822 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC17.3■□□□□ 0.36
PtprkP35822 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PtprkP35822 Fdps-201ENSMUST00000081848 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PtprkP35822 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PtprkP35822 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms