Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nckap1P28660 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nckap1P28660 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nckap1P28660 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nckap1P28660 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nckap1P28660 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.08□□□□□ -0.64
Nckap1P28660 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nckap1P28660 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Nckap1P28660 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.07□□□□□ -0.64
Nckap1P28660 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Nckap1P28660 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC11.07□□□□□ -0.64
Nckap1P28660 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Nckap1P28660 Gm12663-201ENSMUST00000118481 958 ntBASIC11.07□□□□□ -0.64
Nckap1P28660 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Nckap1P28660 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.07□□□□□ -0.64
Nckap1P28660 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC11.07□□□□□ -0.64
Nckap1P28660 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC11.07□□□□□ -0.64
Nckap1P28660 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Gm9372-201ENSMUST00000168454 430 ntBASIC11.07□□□□□ -0.64
Nckap1P28660 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Nckap1P28660 Gm26989-201ENSMUST00000182608 749 ntBASIC11.07□□□□□ -0.64
Nckap1P28660 Gm19013-201ENSMUST00000183895 1222 ntBASIC11.07□□□□□ -0.64
Nckap1P28660 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Nckap1P28660 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.07□□□□□ -0.64
Nckap1P28660 Gm19014-201ENSMUST00000184828 1189 ntBASIC11.07□□□□□ -0.64
Nckap1P28660 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC11.07□□□□□ -0.64
Nckap1P28660 Ighv1-2-201ENSMUST00000195325 378 ntBASIC11.07□□□□□ -0.64
Nckap1P28660 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC11.07□□□□□ -0.64
Nckap1P28660 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Gm8181-201ENSMUST00000062242 669 ntBASIC11.07□□□□□ -0.64
Nckap1P28660 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Nckap1P28660 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Gm8325-201ENSMUST00000099086 453 ntBASIC11.07□□□□□ -0.64
Nckap1P28660 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Gm44153-201ENSMUST00000204162 1580 ntBASIC11.07□□□□□ -0.64
Nckap1P28660 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.07□□□□□ -0.64
Nckap1P28660 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Nckap1P28660 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nckap1P28660 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nckap1P28660 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Nckap1P28660 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Nckap1P28660 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nckap1P28660 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nckap1P28660 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nckap1P28660 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nckap1P28660 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nckap1P28660 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nckap1P28660 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nckap1P28660 Gm43152-201ENSMUST00000202495 1638 ntBASIC11.06□□□□□ -0.64
Nckap1P28660 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nckap1P28660 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.06□□□□□ -0.64
Nckap1P28660 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nckap1P28660 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nckap1P28660 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nckap1P28660 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC11.06□□□□□ -0.64
Nckap1P28660 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Nckap1P28660 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nckap1P28660 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nckap1P28660 Gm15003-201ENSMUST00000118884 446 ntBASIC11.06□□□□□ -0.64
Nckap1P28660 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC11.06□□□□□ -0.64
Nckap1P28660 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nckap1P28660 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.06□□□□□ -0.64
Nckap1P28660 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.06□□□□□ -0.64
Nckap1P28660 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nckap1P28660 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms