Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Gm10179-201ENSMUST00000086233 688 ntBASIC9.55□□□□□ -0.88
H3f3cP02301 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
H3f3cP02301 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC9.55□□□□□ -0.88
H3f3cP02301 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
H3f3cP02301 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
H3f3cP02301 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
H3f3cP02301 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
H3f3cP02301 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
H3f3cP02301 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
H3f3cP02301 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
H3f3cP02301 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
H3f3cP02301 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
H3f3cP02301 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC9.55□□□□□ -0.88
H3f3cP02301 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
H3f3cP02301 Gm21136-201ENSMUST00000186812 2575 ntBASIC9.55□□□□□ -0.88
H3f3cP02301 Gm6605-201ENSMUST00000031488 2574 ntBASIC9.55□□□□□ -0.88
H3f3cP02301 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
H3f3cP02301 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC9.55□□□□□ -0.88
H3f3cP02301 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
H3f3cP02301 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
H3f3cP02301 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC9.55□□□□□ -0.88
H3f3cP02301 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
H3f3cP02301 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
H3f3cP02301 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
H3f3cP02301 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
H3f3cP02301 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
H3f3cP02301 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
H3f3cP02301 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
H3f3cP02301 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
H3f3cP02301 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC9.54□□□□□ -0.88
H3f3cP02301 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
H3f3cP02301 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
H3f3cP02301 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3cP02301 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC9.54□□□□□ -0.88
H3f3cP02301 Gm37954-201ENSMUST00000195400 2071 ntBASIC9.54□□□□□ -0.88
H3f3cP02301 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3cP02301 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3cP02301 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
H3f3cP02301 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3cP02301 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3cP02301 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
H3f3cP02301 Gm9915-201ENSMUST00000066196 1383 ntBASIC9.54□□□□□ -0.88
H3f3cP02301 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3cP02301 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3cP02301 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3cP02301 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3cP02301 Gm4900-201ENSMUST00000222046 1628 ntBASIC9.54□□□□□ -0.88
H3f3cP02301 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
H3f3cP02301 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
H3f3cP02301 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
H3f3cP02301 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3cP02301 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC9.54□□□□□ -0.88
H3f3cP02301 Mup-ps29-201ENSMUST00000122281 202 ntBASIC9.54□□□□□ -0.88
H3f3cP02301 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC9.54□□□□□ -0.88
H3f3cP02301 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC9.54□□□□□ -0.88
H3f3cP02301 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3cP02301 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3cP02301 Gm22902-201ENSMUST00000158488 302 ntBASIC9.54□□□□□ -0.88
H3f3cP02301 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3cP02301 Gm10731-201ENSMUST00000181171 448 ntBASIC9.54□□□□□ -0.88
H3f3cP02301 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3cP02301 Gm27910-201ENSMUST00000185004 107 ntBASIC9.54□□□□□ -0.88
H3f3cP02301 Gm5542-201ENSMUST00000195485 1089 ntBASIC9.54□□□□□ -0.88
H3f3cP02301 Gm43058-201ENSMUST00000197645 625 ntBASIC9.54□□□□□ -0.88
H3f3cP02301 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3cP02301 Gm9463-201ENSMUST00000206707 601 ntBASIC9.54□□□□□ -0.88
H3f3cP02301 Gm45770-201ENSMUST00000212105 616 ntBASIC9.54□□□□□ -0.88
H3f3cP02301 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3cP02301 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3cP02301 CT010506.1-201ENSMUST00000223673 349 ntBASIC9.54□□□□□ -0.88
H3f3cP02301 AC159002.1-201ENSMUST00000226714 924 ntBASIC9.54□□□□□ -0.88
H3f3cP02301 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3cP02301 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
H3f3cP02301 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
H3f3cP02301 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3cP02301 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC9.54□□□□□ -0.88
H3f3cP02301 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3cP02301 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC9.54□□□□□ -0.88
H3f3cP02301 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3cP02301 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3cP02301 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3cP02301 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3cP02301 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
H3f3cP02301 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
H3f3cP02301 Gm44153-201ENSMUST00000204162 1580 ntBASIC9.54□□□□□ -0.88
H3f3cP02301 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3cP02301 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3cP02301 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3cP02301 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
H3f3cP02301 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3cP02301 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
H3f3cP02301 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
H3f3cP02301 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
H3f3cP02301 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3cP02301 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3cP02301 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC9.53□□□□□ -0.88
H3f3cP02301 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3cP02301 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC9.53□□□□□ -0.88
H3f3cP02301 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
H3f3cP02301 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms