Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
CopeO89079 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
CopeO89079 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CopeO89079 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.39□□□□□ -0.59
CopeO89079 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.39□□□□□ -0.59
CopeO89079 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.39□□□□□ -0.59
CopeO89079 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CopeO89079 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
CopeO89079 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
CopeO89079 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CopeO89079 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
CopeO89079 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CopeO89079 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CopeO89079 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CopeO89079 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CopeO89079 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CopeO89079 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
CopeO89079 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CopeO89079 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CopeO89079 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CopeO89079 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC11.38□□□□□ -0.59
CopeO89079 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CopeO89079 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CopeO89079 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CopeO89079 Gm11735-201ENSMUST00000106377 1581 ntBASIC11.38□□□□□ -0.59
CopeO89079 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CopeO89079 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.38□□□□□ -0.59
CopeO89079 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CopeO89079 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC11.38□□□□□ -0.59
CopeO89079 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CopeO89079 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
CopeO89079 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CopeO89079 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
CopeO89079 Gm4294-201ENSMUST00000105169 614 ntBASIC11.38□□□□□ -0.59
CopeO89079 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
CopeO89079 Gm8731-201ENSMUST00000118088 412 ntBASIC11.38□□□□□ -0.59
CopeO89079 Gm15566-201ENSMUST00000121130 590 ntBASIC11.38□□□□□ -0.59
CopeO89079 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
CopeO89079 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.38□□□□□ -0.59
CopeO89079 Gm28746-201ENSMUST00000187453 380 ntBASIC11.38□□□□□ -0.59
CopeO89079 Gm4482-201ENSMUST00000200876 742 ntBASIC11.38□□□□□ -0.59
CopeO89079 Gm19208-201ENSMUST00000213861 912 ntBASIC11.38□□□□□ -0.59
CopeO89079 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.38□□□□□ -0.59
CopeO89079 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.38□□□□□ -0.59
CopeO89079 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.38□□□□□ -0.59
CopeO89079 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CopeO89079 Gm8385-201ENSMUST00000058999 643 ntBASIC11.38□□□□□ -0.59
CopeO89079 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CopeO89079 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CopeO89079 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CopeO89079 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
CopeO89079 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
CopeO89079 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CopeO89079 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CopeO89079 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CopeO89079 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CopeO89079 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CopeO89079 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CopeO89079 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CopeO89079 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CopeO89079 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CopeO89079 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CopeO89079 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
CopeO89079 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CopeO89079 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CopeO89079 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.38□□□□□ -0.59
CopeO89079 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CopeO89079 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CopeO89079 Gm42602-201ENSMUST00000200288 3224 ntBASIC11.37□□□□□ -0.59
CopeO89079 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
CopeO89079 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
CopeO89079 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.37□□□□□ -0.59
CopeO89079 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
CopeO89079 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CopeO89079 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
CopeO89079 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CopeO89079 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CopeO89079 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CopeO89079 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CopeO89079 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
CopeO89079 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CopeO89079 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CopeO89079 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CopeO89079 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CopeO89079 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
CopeO89079 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CopeO89079 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
CopeO89079 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
CopeO89079 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.37□□□□□ -0.59
CopeO89079 Gm19246-201ENSMUST00000173599 255 ntBASIC11.37□□□□□ -0.59
CopeO89079 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
CopeO89079 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.37□□□□□ -0.59
CopeO89079 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
CopeO89079 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC11.37□□□□□ -0.59
CopeO89079 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC11.37□□□□□ -0.59
CopeO89079 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CopeO89079 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CopeO89079 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CopeO89079 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CopeO89079 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms