Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NpcdF8VQB8 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
NpcdF8VQB8 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NpcdF8VQB8 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NpcdF8VQB8 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NpcdF8VQB8 Gm42943-201ENSMUST00000199676 3242 ntBASIC13.41□□□□□ -0.26
NpcdF8VQB8 Gm11540-201ENSMUST00000117457 780 ntBASIC13.41□□□□□ -0.26
NpcdF8VQB8 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NpcdF8VQB8 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC13.41□□□□□ -0.26
NpcdF8VQB8 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NpcdF8VQB8 Gm16165-201ENSMUST00000160140 795 ntBASIC13.41□□□□□ -0.26
NpcdF8VQB8 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NpcdF8VQB8 Gm6216-201ENSMUST00000182390 687 ntBASIC13.41□□□□□ -0.26
NpcdF8VQB8 Gm27444-201ENSMUST00000184157 137 ntBASIC13.41□□□□□ -0.26
NpcdF8VQB8 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC13.41□□□□□ -0.26
NpcdF8VQB8 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
NpcdF8VQB8 Gm38103-201ENSMUST00000191707 864 ntBASIC13.41□□□□□ -0.26
NpcdF8VQB8 Gm36991-201ENSMUST00000191800 648 ntBASIC13.41□□□□□ -0.26
NpcdF8VQB8 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC13.41□□□□□ -0.26
NpcdF8VQB8 AC122024.3-201ENSMUST00000217719 294 ntBASIC13.41□□□□□ -0.26
NpcdF8VQB8 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NpcdF8VQB8 CT030035.1-201ENSMUST00000223964 935 ntBASIC13.41□□□□□ -0.26
NpcdF8VQB8 AC132260.2-201ENSMUST00000224482 344 ntBASIC13.41□□□□□ -0.26
NpcdF8VQB8 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NpcdF8VQB8 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NpcdF8VQB8 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.41□□□□□ -0.26
NpcdF8VQB8 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NpcdF8VQB8 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
NpcdF8VQB8 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NpcdF8VQB8 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NpcdF8VQB8 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NpcdF8VQB8 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NpcdF8VQB8 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NpcdF8VQB8 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NpcdF8VQB8 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
NpcdF8VQB8 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NpcdF8VQB8 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NpcdF8VQB8 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NpcdF8VQB8 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NpcdF8VQB8 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.4□□□□□ -0.26
NpcdF8VQB8 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Gm6755-201ENSMUST00000100598 864 ntBASIC13.4□□□□□ -0.26
NpcdF8VQB8 Gm6740-201ENSMUST00000100617 864 ntBASIC13.4□□□□□ -0.26
NpcdF8VQB8 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Gm12684-201ENSMUST00000118675 999 ntBASIC13.4□□□□□ -0.26
NpcdF8VQB8 Gm15636-201ENSMUST00000119205 668 ntBASIC13.4□□□□□ -0.26
NpcdF8VQB8 Gm11736-201ENSMUST00000121468 505 ntBASIC13.4□□□□□ -0.26
NpcdF8VQB8 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Gm8464-202ENSMUST00000146697 1142 ntBASIC13.4□□□□□ -0.26
NpcdF8VQB8 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Gm4750-201ENSMUST00000151942 1142 ntBASIC13.4□□□□□ -0.26
NpcdF8VQB8 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC13.4□□□□□ -0.26
NpcdF8VQB8 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Gm38233-201ENSMUST00000194259 807 ntBASIC13.4□□□□□ -0.26
NpcdF8VQB8 Gm42687-201ENSMUST00000199075 164 ntBASIC13.4□□□□□ -0.26
NpcdF8VQB8 Gm44908-201ENSMUST00000208610 266 ntBASIC13.4□□□□□ -0.26
NpcdF8VQB8 Gm7183-201ENSMUST00000213870 1005 ntBASIC13.4□□□□□ -0.26
NpcdF8VQB8 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC13.4□□□□□ -0.26
NpcdF8VQB8 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Mir341-201ENSMUST00000093593 96 ntBASIC13.4□□□□□ -0.26
NpcdF8VQB8 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NpcdF8VQB8 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
NpcdF8VQB8 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
NpcdF8VQB8 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
NpcdF8VQB8 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
NpcdF8VQB8 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms