Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Gm43852-201ENSMUST00000202098 917 ntBASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Gm44136-201ENSMUST00000203819 1106 ntBASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Gm19327-201ENSMUST00000220651 3271 ntBASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Gm4294-201ENSMUST00000105169 614 ntBASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Gm7666-201ENSMUST00000146631 819 ntBASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Gm44270-201ENSMUST00000203084 1234 ntBASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Gm17825-201ENSMUST00000206836 794 ntBASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Gm7183-201ENSMUST00000213870 1005 ntBASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Gm2517-201ENSMUST00000215651 348 ntBASIC9.42□□□□□ -0.9
Gm3550W4VSN7 AC122408.1-201ENSMUST00000218949 218 ntBASIC9.42□□□□□ -0.9
Gm3550W4VSN7 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Ginm1-202ENSMUST00000065124 300 ntBASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 AC207128.2-201ENSMUST00000223708 1924 ntBASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm3550W4VSN7 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Gm3550W4VSN7 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms