Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Gm11509-201ENSMUST00000117358 325 ntBASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Gm11783-201ENSMUST00000119549 885 ntBASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Gm8876-201ENSMUST00000120768 1122 ntBASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.27□□□□□ -0.77
Trim13Q9CYB0 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Gm27320-201ENSMUST00000184892 109 ntBASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Gm38319-201ENSMUST00000194537 1266 ntBASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Gm43184-201ENSMUST00000197247 542 ntBASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Dysf-215ENSMUST00000204591 6641 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Ctnnd1-205ENSMUST00000111670 5047 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Gm12799-201ENSMUST00000118151 2560 ntBASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Setd1b-201ENSMUST00000056053 7362 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Gm13296-201ENSMUST00000117854 997 ntBASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Gm4857-201ENSMUST00000192718 785 ntBASIC10.26□□□□□ -0.77
Trim13Q9CYB0 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Gm43974-201ENSMUST00000205080 684 ntBASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Gm45113-201ENSMUST00000207518 165 ntBASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Gm6015-201ENSMUST00000217493 1586 ntBASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trim13Q9CYB0 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms