Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RtcbQ99LF4 Gm7805-201ENSMUST00000154348 448 ntBASIC13.71□□□□□ -0.21
RtcbQ99LF4 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC13.71□□□□□ -0.21
RtcbQ99LF4 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RtcbQ99LF4 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
RtcbQ99LF4 Gm20568-201ENSMUST00000197129 208 ntBASIC13.71□□□□□ -0.21
RtcbQ99LF4 Gm3527-201ENSMUST00000198905 460 ntBASIC13.71□□□□□ -0.21
RtcbQ99LF4 Gm42732-201ENSMUST00000202887 1197 ntBASIC13.71□□□□□ -0.21
RtcbQ99LF4 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RtcbQ99LF4 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC13.71□□□□□ -0.21
RtcbQ99LF4 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
RtcbQ99LF4 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RtcbQ99LF4 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RtcbQ99LF4 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RtcbQ99LF4 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RtcbQ99LF4 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RtcbQ99LF4 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RtcbQ99LF4 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RtcbQ99LF4 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RtcbQ99LF4 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RtcbQ99LF4 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RtcbQ99LF4 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RtcbQ99LF4 Gm45124-201ENSMUST00000206723 2755 ntBASIC13.71□□□□□ -0.22
RtcbQ99LF4 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.71□□□□□ -0.22
RtcbQ99LF4 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RtcbQ99LF4 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RtcbQ99LF4 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RtcbQ99LF4 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RtcbQ99LF4 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC13.7□□□□□ -0.22
RtcbQ99LF4 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RtcbQ99LF4 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RtcbQ99LF4 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RtcbQ99LF4 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RtcbQ99LF4 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RtcbQ99LF4 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RtcbQ99LF4 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RtcbQ99LF4 Gm12470-201ENSMUST00000117239 1049 ntBASIC13.7□□□□□ -0.22
RtcbQ99LF4 Gm5764-201ENSMUST00000118817 885 ntBASIC13.7□□□□□ -0.22
RtcbQ99LF4 Gm15636-201ENSMUST00000119205 668 ntBASIC13.7□□□□□ -0.22
RtcbQ99LF4 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC13.7□□□□□ -0.22
RtcbQ99LF4 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RtcbQ99LF4 AC124613.1-201ENSMUST00000198711 88 ntBASIC13.7□□□□□ -0.22
RtcbQ99LF4 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RtcbQ99LF4 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC13.7□□□□□ -0.22
RtcbQ99LF4 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC13.7□□□□□ -0.22
RtcbQ99LF4 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RtcbQ99LF4 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RtcbQ99LF4 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RtcbQ99LF4 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RtcbQ99LF4 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC13.7□□□□□ -0.22
RtcbQ99LF4 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RtcbQ99LF4 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RtcbQ99LF4 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
RtcbQ99LF4 Gm6560-201ENSMUST00000198588 1591 ntBASIC13.7□□□□□ -0.22
RtcbQ99LF4 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RtcbQ99LF4 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RtcbQ99LF4 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RtcbQ99LF4 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RtcbQ99LF4 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RtcbQ99LF4 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RtcbQ99LF4 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RtcbQ99LF4 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RtcbQ99LF4 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RtcbQ99LF4 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RtcbQ99LF4 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RtcbQ99LF4 Gm42815-201ENSMUST00000198787 1470 ntBASIC13.69□□□□□ -0.22
RtcbQ99LF4 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RtcbQ99LF4 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RtcbQ99LF4 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RtcbQ99LF4 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RtcbQ99LF4 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RtcbQ99LF4 Gm11736-201ENSMUST00000121468 505 ntBASIC13.69□□□□□ -0.22
RtcbQ99LF4 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC13.69□□□□□ -0.22
RtcbQ99LF4 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RtcbQ99LF4 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RtcbQ99LF4 Gm4775-201ENSMUST00000169588 402 ntBASIC13.69□□□□□ -0.22
RtcbQ99LF4 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RtcbQ99LF4 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC13.69□□□□□ -0.22
RtcbQ99LF4 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC13.69□□□□□ -0.22
RtcbQ99LF4 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
RtcbQ99LF4 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RtcbQ99LF4 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RtcbQ99LF4 AC154461.1-201ENSMUST00000224207 1005 ntBASIC13.69□□□□□ -0.22
RtcbQ99LF4 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RtcbQ99LF4 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RtcbQ99LF4 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RtcbQ99LF4 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RtcbQ99LF4 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RtcbQ99LF4 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RtcbQ99LF4 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RtcbQ99LF4 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RtcbQ99LF4 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RtcbQ99LF4 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RtcbQ99LF4 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RtcbQ99LF4 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RtcbQ99LF4 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RtcbQ99LF4 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RtcbQ99LF4 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
RtcbQ99LF4 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC13.68□□□□□ -0.22
RtcbQ99LF4 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms