Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Gm14208-201ENSMUST00000119645 678 ntBASIC11.47□□□□□ -0.57
Trim60Q8VI40 Gm15595-201ENSMUST00000120840 961 ntBASIC11.47□□□□□ -0.57
Trim60Q8VI40 Gm11450-201ENSMUST00000121144 333 ntBASIC11.47□□□□□ -0.57
Trim60Q8VI40 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.47□□□□□ -0.57
Trim60Q8VI40 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.47□□□□□ -0.57
Trim60Q8VI40 Gm26461-201ENSMUST00000175064 290 ntBASIC11.47□□□□□ -0.57
Trim60Q8VI40 Gm23694-201ENSMUST00000179335 110 ntBASIC11.47□□□□□ -0.57
Trim60Q8VI40 Gm28032-201ENSMUST00000184104 96 ntBASIC11.47□□□□□ -0.57
Trim60Q8VI40 AU022133-201ENSMUST00000200601 873 ntBASIC11.47□□□□□ -0.57
Trim60Q8VI40 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Gm8574-201ENSMUST00000203207 924 ntBASIC11.47□□□□□ -0.57
Trim60Q8VI40 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Gm2517-201ENSMUST00000215651 348 ntBASIC11.47□□□□□ -0.57
Trim60Q8VI40 Gm9111-201ENSMUST00000219394 709 ntBASIC11.47□□□□□ -0.57
Trim60Q8VI40 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.47□□□□□ -0.57
Trim60Q8VI40 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trim60Q8VI40 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim60Q8VI40 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim60Q8VI40 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Trim60Q8VI40 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trim60Q8VI40 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim60Q8VI40 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim60Q8VI40 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim60Q8VI40 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim60Q8VI40 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim60Q8VI40 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim60Q8VI40 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.46□□□□□ -0.57
Trim60Q8VI40 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim60Q8VI40 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim60Q8VI40 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC11.46□□□□□ -0.57
Trim60Q8VI40 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim60Q8VI40 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim60Q8VI40 Gm22920-201ENSMUST00000102175 109 ntBASIC11.46□□□□□ -0.57
Trim60Q8VI40 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.46□□□□□ -0.57
Trim60Q8VI40 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim60Q8VI40 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.46□□□□□ -0.57
Trim60Q8VI40 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Trim60Q8VI40 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim60Q8VI40 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim60Q8VI40 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Trim60Q8VI40 Gm25226-201ENSMUST00000158198 123 ntBASIC11.46□□□□□ -0.57
Trim60Q8VI40 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.46□□□□□ -0.57
Trim60Q8VI40 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim60Q8VI40 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.46□□□□□ -0.57
Trim60Q8VI40 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trim60Q8VI40 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.46□□□□□ -0.57
Trim60Q8VI40 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim60Q8VI40 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.46□□□□□ -0.57
Trim60Q8VI40 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.46□□□□□ -0.57
Trim60Q8VI40 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim60Q8VI40 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trim60Q8VI40 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trim60Q8VI40 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim60Q8VI40 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim60Q8VI40 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim60Q8VI40 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trim60Q8VI40 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.58
Trim60Q8VI40 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim60Q8VI40 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim60Q8VI40 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.58
Trim60Q8VI40 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Trim60Q8VI40 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC11.46□□□□□ -0.58
Trim60Q8VI40 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.45□□□□□ -0.58
Trim60Q8VI40 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim60Q8VI40 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Gm22711-201ENSMUST00000116890 133 ntBASIC11.45□□□□□ -0.58
Trim60Q8VI40 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.45□□□□□ -0.58
Trim60Q8VI40 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Trim60Q8VI40 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms