Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trim29Q8R2Q0 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim29Q8R2Q0 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim29Q8R2Q0 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim29Q8R2Q0 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.68□□□□□ -0.38
Trim29Q8R2Q0 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim29Q8R2Q0 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim29Q8R2Q0 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim29Q8R2Q0 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trim29Q8R2Q0 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim29Q8R2Q0 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim29Q8R2Q0 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Gm14398-201ENSMUST00000117287 1073 ntBASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Gm11573-201ENSMUST00000119956 394 ntBASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Gm4917-201ENSMUST00000121452 650 ntBASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Gm6485-201ENSMUST00000160676 439 ntBASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Gm37826-201ENSMUST00000195329 322 ntBASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Trim29Q8R2Q0 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 Uba52-ps-201ENSMUST00000183770 379 ntBASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 Gm37905-201ENSMUST00000195310 341 ntBASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 Gm44100-201ENSMUST00000204329 436 ntBASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 Saa-ps-201ENSMUST00000211148 320 ntBASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 Mt1-202ENSMUST00000211807 1085 ntBASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 Gm9111-201ENSMUST00000219394 709 ntBASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim29Q8R2Q0 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms