Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
Clrn1Q8K445 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Clrn1Q8K445 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Clrn1Q8K445 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Clrn1Q8K445 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.46□□□□□ -0.73
Clrn1Q8K445 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Clrn1Q8K445 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Clrn1Q8K445 Gm12616-201ENSMUST00000118594 382 ntBASIC10.46□□□□□ -0.73
Clrn1Q8K445 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Clrn1Q8K445 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Clrn1Q8K445 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Clrn1Q8K445 Mir3102-201ENSMUST00000175555 104 ntBASIC10.46□□□□□ -0.73
Clrn1Q8K445 Gm12624-201ENSMUST00000177615 382 ntBASIC10.46□□□□□ -0.73
Clrn1Q8K445 Gm12621-201ENSMUST00000177760 382 ntBASIC10.46□□□□□ -0.73
Clrn1Q8K445 Gm12615-201ENSMUST00000177970 382 ntBASIC10.46□□□□□ -0.73
Clrn1Q8K445 Gm12622-201ENSMUST00000177975 382 ntBASIC10.46□□□□□ -0.73
Clrn1Q8K445 Gm12627-201ENSMUST00000178412 382 ntBASIC10.46□□□□□ -0.73
Clrn1Q8K445 Gm12625-201ENSMUST00000179122 382 ntBASIC10.46□□□□□ -0.73
Clrn1Q8K445 Gm12614-201ENSMUST00000179586 382 ntBASIC10.46□□□□□ -0.73
Clrn1Q8K445 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Clrn1Q8K445 Gm12613-201ENSMUST00000180323 382 ntBASIC10.46□□□□□ -0.73
Clrn1Q8K445 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC10.46□□□□□ -0.73
Clrn1Q8K445 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Clrn1Q8K445 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Clrn1Q8K445 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC10.46□□□□□ -0.73
Clrn1Q8K445 Gm37986-201ENSMUST00000193285 383 ntBASIC10.46□□□□□ -0.73
Clrn1Q8K445 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Clrn1Q8K445 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
Clrn1Q8K445 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Clrn1Q8K445 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC10.46□□□□□ -0.73
Clrn1Q8K445 CT010506.1-201ENSMUST00000223673 349 ntBASIC10.46□□□□□ -0.73
Clrn1Q8K445 AC165260.2-203ENSMUST00000224237 336 ntBASIC10.46□□□□□ -0.73
Clrn1Q8K445 AC124433.1-201ENSMUST00000224483 1063 ntBASIC10.46□□□□□ -0.73
Clrn1Q8K445 Gm8899-201ENSMUST00000214635 1332 ntBASIC10.46□□□□□ -0.73
Clrn1Q8K445 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Clrn1Q8K445 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Clrn1Q8K445 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Clrn1Q8K445 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.46□□□□□ -0.74
Clrn1Q8K445 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Clrn1Q8K445 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Clrn1Q8K445 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Clrn1Q8K445 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Clrn1Q8K445 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Clrn1Q8K445 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Clrn1Q8K445 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Clrn1Q8K445 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.46□□□□□ -0.74
Clrn1Q8K445 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Clrn1Q8K445 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Clrn1Q8K445 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Clrn1Q8K445 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.74
Clrn1Q8K445 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.45□□□□□ -0.74
Clrn1Q8K445 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Clrn1Q8K445 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Gm15131-201ENSMUST00000119124 595 ntBASIC10.45□□□□□ -0.74
Clrn1Q8K445 Gm12029-201ENSMUST00000120073 832 ntBASIC10.45□□□□□ -0.74
Clrn1Q8K445 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC10.45□□□□□ -0.74
Clrn1Q8K445 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Gm43520-201ENSMUST00000197996 164 ntBASIC10.45□□□□□ -0.74
Clrn1Q8K445 Gm18539-201ENSMUST00000204745 1090 ntBASIC10.45□□□□□ -0.74
Clrn1Q8K445 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Gm9463-201ENSMUST00000206707 601 ntBASIC10.45□□□□□ -0.74
Clrn1Q8K445 Gm19324-201ENSMUST00000213229 1169 ntBASIC10.45□□□□□ -0.74
Clrn1Q8K445 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Gm43061-201ENSMUST00000198850 2241 ntBASIC10.45□□□□□ -0.74
Clrn1Q8K445 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms