Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.09□□□□□ -0.63
Rpp38Q80UU2 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rpp38Q80UU2 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rpp38Q80UU2 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.09□□□□□ -0.63
Rpp38Q80UU2 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rpp38Q80UU2 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.09□□□□□ -0.63
Rpp38Q80UU2 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Rpp38Q80UU2 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Gm26013-201ENSMUST00000104404 119 ntBASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Gm11952-201ENSMUST00000121172 821 ntBASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Mir1896-201ENSMUST00000122641 81 ntBASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Gm24398-201ENSMUST00000157870 109 ntBASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Gm26134-201ENSMUST00000178484 110 ntBASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Gm28746-201ENSMUST00000187453 380 ntBASIC11.08□□□□□ -0.64
Rpp38Q80UU2 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Gm44158-201ENSMUST00000203881 505 ntBASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Gm18042-201ENSMUST00000219887 790 ntBASIC11.08□□□□□ -0.64
Rpp38Q80UU2 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rpp38Q80UU2 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rpp38Q80UU2 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rpp38Q80UU2 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rpp38Q80UU2 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rpp38Q80UU2 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Rpp38Q80UU2 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rpp38Q80UU2 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rpp38Q80UU2 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rpp38Q80UU2 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Rpp38Q80UU2 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.07□□□□□ -0.64
Rpp38Q80UU2 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rpp38Q80UU2 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Rpp38Q80UU2 Gm12516-201ENSMUST00000120819 385 ntBASIC11.07□□□□□ -0.64
Rpp38Q80UU2 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rpp38Q80UU2 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rpp38Q80UU2 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.07□□□□□ -0.64
Rpp38Q80UU2 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.07□□□□□ -0.64
Rpp38Q80UU2 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC11.07□□□□□ -0.64
Rpp38Q80UU2 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rpp38Q80UU2 Gm17877-201ENSMUST00000192578 814 ntBASIC11.07□□□□□ -0.64
Rpp38Q80UU2 Gm42657-201ENSMUST00000201746 211 ntBASIC11.07□□□□□ -0.64
Rpp38Q80UU2 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC11.07□□□□□ -0.64
Rpp38Q80UU2 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rpp38Q80UU2 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.07□□□□□ -0.64
Rpp38Q80UU2 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC11.07□□□□□ -0.64
Rpp38Q80UU2 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.07□□□□□ -0.64
Rpp38Q80UU2 AC154461.3-201ENSMUST00000224831 573 ntBASIC11.07□□□□□ -0.64
Rpp38Q80UU2 CT025618.1-203ENSMUST00000227008 589 ntBASIC11.07□□□□□ -0.64
Rpp38Q80UU2 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rpp38Q80UU2 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rpp38Q80UU2 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rpp38Q80UU2 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rpp38Q80UU2 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rpp38Q80UU2 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rpp38Q80UU2 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rpp38Q80UU2 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Rpp38Q80UU2 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rpp38Q80UU2 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.07□□□□□ -0.64
Rpp38Q80UU2 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rpp38Q80UU2 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rpp38Q80UU2 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms