Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Gm24933-201ENSMUST00000103762 110 ntBASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Gm23252-201ENSMUST00000103776 110 ntBASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Gm26443-201ENSMUST00000179610 110 ntBASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 AC121567.1-201ENSMUST00000227213 842 ntBASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Gm3372-201ENSMUST00000198806 1792 ntBASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Gm45041-201ENSMUST00000207366 3108 ntBASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Gm29157-201ENSMUST00000188753 612 ntBASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Gm37301-201ENSMUST00000195412 568 ntBASIC12.85□□□□□ -0.35
Nup98Q6PFD9 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Rubie-203ENSMUST00000227803 2430 ntBASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Gm43052-201ENSMUST00000201451 1628 ntBASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Gm22582-201ENSMUST00000102283 94 ntBASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Gm5254-201ENSMUST00000188353 977 ntBASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Gm42803-201ENSMUST00000201051 451 ntBASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nup98Q6PFD9 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Gm42449-201ENSMUST00000200349 2258 ntBASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms