Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Wdhd1-201ENSMUST00000111790 2962 ntTSL 2 BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Gpm6b-206ENSMUST00000112228 3083 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Gm26848-201ENSMUST00000181052 2467 ntTSL 5 BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Gfap-202ENSMUST00000077902 2600 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Ssrp1-209ENSMUST00000168266 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Gm8062-201ENSMUST00000139696 444 ntBASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Gm30285-201ENSMUST00000214614 422 ntBASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 AC166349.1-201ENSMUST00000220866 695 ntBASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Gm9823-201ENSMUST00000051212 327 ntBASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Gm16478-201ENSMUST00000208113 5084 ntBASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Adcy3-201ENSMUST00000020984 4348 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Kir3dl2-201ENSMUST00000072125 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Add2-210ENSMUST00000205034 3266 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Fxr1-208ENSMUST00000200392 3014 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Sycp2l-201ENSMUST00000124093 2641 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Gm37582-201ENSMUST00000192953 1409 ntBASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.49□□□□□ -0.73
Rnf220Q6PDX6 2310002L09Rik-202ENSMUST00000095023 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Mgme1-201ENSMUST00000028910 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Iqgap3-204ENSMUST00000194440 3263 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Epn2-204ENSMUST00000108713 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Grik1-211ENSMUST00000228188 3221 ntBASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 9630001P10Rik-201ENSMUST00000181083 2799 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Gm15370-201ENSMUST00000117158 253 ntBASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Gm3096-201ENSMUST00000185770 364 ntBASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 AY702102-202ENSMUST00000194651 1173 ntBASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Gm10608-202ENSMUST00000213924 676 ntBASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Srprb-201ENSMUST00000035157 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 4833420G17Rik-201ENSMUST00000026519 2565 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 AC131068.2-201ENSMUST00000226175 1453 ntBASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Gal3st2-201ENSMUST00000094663 2844 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf220Q6PDX6 Ctage5-201ENSMUST00000021384 1628 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rnf220Q6PDX6 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Rnf220Q6PDX6 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rnf220Q6PDX6 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms