Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Casc4Q6P2L7 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Casc4Q6P2L7 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC11.27□□□□□ -0.61
Casc4Q6P2L7 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Gm11667-201ENSMUST00000119828 486 ntBASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Mir7076-201ENSMUST00000183519 74 ntBASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Gm2875-201ENSMUST00000211333 360 ntBASIC11.26□□□□□ -0.61
Casc4Q6P2L7 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.26□□□□□ -0.61
Casc4Q6P2L7 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Snord17-201ENSMUST00000104526 238 ntBASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Gm12218-201ENSMUST00000117666 399 ntBASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Gm22138-201ENSMUST00000158748 128 ntBASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Gm17877-201ENSMUST00000192578 814 ntBASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Casc4Q6P2L7 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms