Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Myo1a-201ENSMUST00000079590 3439 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Cks1brtQ3UNC9 Helz2-202ENSMUST00000108831 10109 ntAPPRIS P2 TSL 5 BASIC7.9□□□□□ -1.15
Cks1brtQ3UNC9 Rora-201ENSMUST00000034766 10878 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Cks1brtQ3UNC9 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Agbl5-201ENSMUST00000069705 2922 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Unc13d-203ENSMUST00000106451 3973 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Unc13d-201ENSMUST00000075036 3967 ntAPPRIS P2 TSL 5 BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Plec-209ENSMUST00000089610 14972 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Vash2-202ENSMUST00000166139 3897 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Bub1b-201ENSMUST00000038341 3668 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Gm1627-201ENSMUST00000188504 2588 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Bcl2l11-201ENSMUST00000019281 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Gm18626-201ENSMUST00000221512 1409 ntBASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 L1cam-201ENSMUST00000066576 4116 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Olfr1278-206ENSMUST00000216229 6819 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Zfx-203ENSMUST00000113926 6762 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Bcas3-205ENSMUST00000108061 3810 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Gm11500-201ENSMUST00000118237 601 ntBASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Gm5370-201ENSMUST00000187187 574 ntBASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Gm37917-201ENSMUST00000194711 392 ntBASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Gm18893-201ENSMUST00000198416 943 ntBASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Gm19994-201ENSMUST00000217086 586 ntBASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Foxm1-201ENSMUST00000073316 4652 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Sfi1-218ENSMUST00000153425 3759 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Fbxo7-204ENSMUST00000130320 5388 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Arhgef9-202ENSMUST00000113876 5342 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Homer1-204ENSMUST00000102752 5713 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Mbnl1-203ENSMUST00000191747 4046 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 AC126444.1-201ENSMUST00000225938 1768 ntBASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 N4bp2-201ENSMUST00000087264 5308 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 2310043P16Rik-201ENSMUST00000205403 3881 ntBASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Lig3-203ENSMUST00000092849 4560 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 AC122367.1-201ENSMUST00000221978 1709 ntBASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Pard3b-203ENSMUST00000094906 7676 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 CT010447.1-201ENSMUST00000225657 1608 ntBASIC7.89□□□□□ -1.15
Cks1brtQ3UNC9 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Cks1brtQ3UNC9 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Cks1brtQ3UNC9 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Cks1brtQ3UNC9 Gm37593-201ENSMUST00000191669 3254 ntBASIC7.88□□□□□ -1.15
Cks1brtQ3UNC9 Spag9-205ENSMUST00000103168 6840 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Cks1brtQ3UNC9 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Cks1brtQ3UNC9 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Cks1brtQ3UNC9 Gm3365-201ENSMUST00000216296 1480 ntBASIC7.88□□□□□ -1.15
Cks1brtQ3UNC9 Sipa1l1-208ENSMUST00000222298 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Cks1brtQ3UNC9 Gm45336-201ENSMUST00000210010 3230 ntTSL 5 BASIC7.88□□□□□ -1.15
Cks1brtQ3UNC9 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Cks1brtQ3UNC9 AC121574.1-201ENSMUST00000228770 3132 ntBASIC7.88□□□□□ -1.15
Cks1brtQ3UNC9 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Cks1brtQ3UNC9 Grpr-201ENSMUST00000033730 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Cks1brtQ3UNC9 Olfr1219-205ENSMUST00000217421 5849 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Cks1brtQ3UNC9 Ogdh-204ENSMUST00000101554 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Cks1brtQ3UNC9 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Cks1brtQ3UNC9 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Cks1brtQ3UNC9 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Cks1brtQ3UNC9 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC7.88□□□□□ -1.15
Cks1brtQ3UNC9 Plcd4-202ENSMUST00000067916 4552 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Cks1brtQ3UNC9 AC149588.2-201ENSMUST00000228182 1859 ntBASIC7.88□□□□□ -1.15
Cks1brtQ3UNC9 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Cks1brtQ3UNC9 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms