Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Myo1h-209ENSMUST00000199567 1307 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Apool-201ENSMUST00000026599 1359 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Gm38227-201ENSMUST00000193036 1602 ntBASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Gabarap-202ENSMUST00000108592 750 ntTSL 3 BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Crisp4-203ENSMUST00000115344 960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Dtx3-205ENSMUST00000137151 346 ntTSL 3 BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Gm6633-201ENSMUST00000173851 270 ntBASIC10.2□□□□□ -0.78
Spg11Q3UHA3 A430073D23Rik-201ENSMUST00000196262 665 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Gm7812-201ENSMUST00000203479 874 ntBASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Ermard-209ENSMUST00000226561 1019 ntBASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Gm32072-201ENSMUST00000200803 1434 ntBASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 AC140209.1-203ENSMUST00000227412 1524 ntBASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Gm5432-201ENSMUST00000180759 1670 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Erich3-203ENSMUST00000189969 3460 ntBASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Spg11Q3UHA3 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Gm22751-201ENSMUST00000102077 109 ntBASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Mir692-3-201ENSMUST00000102079 109 ntBASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Mir692-2-201ENSMUST00000102081 109 ntBASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Oosp2-201ENSMUST00000121793 677 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Ighv5-10-201ENSMUST00000194591 252 ntBASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Gm31466-201ENSMUST00000195457 916 ntTSL 3 BASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Gm43833-201ENSMUST00000198828 293 ntBASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Gm19090-201ENSMUST00000218187 774 ntBASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Gm3791-201ENSMUST00000220790 768 ntBASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Spg11Q3UHA3 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Gm9947-201ENSMUST00000067599 2920 ntBASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Gm28309-201ENSMUST00000136302 623 ntTSL 5 BASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Gm5342-201ENSMUST00000181982 1003 ntBASIC10.19□□□□□ -0.78
Spg11Q3UHA3 2310016D03Rik-201ENSMUST00000190206 1547 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Gm39090-201ENSMUST00000205284 972 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Spg11Q3UHA3 AC155300.1-201ENSMUST00000219134 480 ntBASIC10.19□□□□□ -0.78
Spg11Q3UHA3 AC156274.1-201ENSMUST00000219193 634 ntBASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Gm10617-201ENSMUST00000098368 1172 ntBASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Prss23-204ENSMUST00000207932 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Spg11Q3UHA3 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Fam216b-202ENSMUST00000118785 1447 ntTSL 5 BASIC10.18□□□□□ -0.78
Spg11Q3UHA3 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms