Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Sypl-202ENSMUST00000076698 4999 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Gm45861-201ENSMUST00000209669 7184 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Dusp27-201ENSMUST00000085992 4018 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Gpr68-203ENSMUST00000110066 3223 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Zfp672-202ENSMUST00000064786 2765 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trim63Q38HM4 Gm12830-201ENSMUST00000137570 2306 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Casr-201ENSMUST00000063597 4534 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Ccdc187-203ENSMUST00000227200 9528 ntAPPRIS ALT2 BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Acsm2-201ENSMUST00000084647 2051 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Mro-206ENSMUST00000179472 2194 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Aasdhppt-201ENSMUST00000051589 2843 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Olfr1219-203ENSMUST00000214442 3694 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Trim63Q38HM4 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Pogz-205ENSMUST00000107270 6399 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Ccdc33-210ENSMUST00000215944 3012 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Amotl1-206ENSMUST00000223132 3046 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Hspd1-ps3-201ENSMUST00000119713 1722 ntBASIC9.06□□□□□ -0.96
Trim63Q38HM4 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
Trim63Q38HM4 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Gm30414-201ENSMUST00000194886 2596 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 St5-202ENSMUST00000079282 4255 ntAPPRIS P4 TSL 5 BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Gm11779-201ENSMUST00000118541 368 ntBASIC9.06□□□□□ -0.96
Trim63Q38HM4 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
Trim63Q38HM4 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Gm26185-201ENSMUST00000157692 266 ntBASIC9.06□□□□□ -0.96
Trim63Q38HM4 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Gm2756-201ENSMUST00000195851 400 ntBASIC9.06□□□□□ -0.96
Trim63Q38HM4 Gm44344-201ENSMUST00000200287 129 ntBASIC9.06□□□□□ -0.96
Trim63Q38HM4 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Gm45691-201ENSMUST00000206905 1120 ntBASIC9.06□□□□□ -0.96
Trim63Q38HM4 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 AC167013.1-201ENSMUST00000228592 202 ntBASIC9.06□□□□□ -0.96
Trim63Q38HM4 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Nrep-201ENSMUST00000051087 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Slc25a44-201ENSMUST00000057935 3577 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Abr-204ENSMUST00000108407 4811 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Gm16059-201ENSMUST00000135583 3778 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Ovch2-201ENSMUST00000106755 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Nucb1-210ENSMUST00000211765 4853 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Mbd5-203ENSMUST00000112754 5978 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Gm37233-201ENSMUST00000192173 6263 ntBASIC9.06□□□□□ -0.96
Trim63Q38HM4 Gpm6b-206ENSMUST00000112228 3083 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Zfp111-201ENSMUST00000056683 3380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Arhgap45-201ENSMUST00000043311 3499 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim63Q38HM4 Far1-211ENSMUST00000164745 3972 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim63Q38HM4 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Dhx32-202ENSMUST00000063669 2644 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Ebpl-201ENSMUST00000022494 10092 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Zfp185-201ENSMUST00000114546 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Filip1-201ENSMUST00000093811 4640 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Tigd4-201ENSMUST00000062623 3459 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Spocd1-201ENSMUST00000084263 3096 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Oprl1-201ENSMUST00000071585 2999 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Gm7933-201ENSMUST00000191215 2255 ntBASIC9.05□□□□□ -0.96
Trim63Q38HM4 A330049N07Rik-203ENSMUST00000220010 1989 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Olfr1350-203ENSMUST00000219278 1768 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Hspd1-ps4-201ENSMUST00000121815 1668 ntBASIC9.05□□□□□ -0.96
Trim63Q38HM4 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Gm14150-201ENSMUST00000122404 1354 ntBASIC9.05□□□□□ -0.96
Trim63Q38HM4 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Unc13d-202ENSMUST00000106450 4046 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Gm13315-201ENSMUST00000120376 991 ntBASIC9.05□□□□□ -0.96
Trim63Q38HM4 Cd63-ps-201ENSMUST00000145417 875 ntBASIC9.05□□□□□ -0.96
Trim63Q38HM4 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim63Q38HM4 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC9.05□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms