Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf1Q07802 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf1Q07802 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf1Q07802 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf1Q07802 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ebf1Q07802 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Ebf1Q07802 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.3□□□□□ -0.6
Ebf1Q07802 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf1Q07802 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf1Q07802 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Ebf1Q07802 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf1Q07802 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.3□□□□□ -0.6
Ebf1Q07802 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.3□□□□□ -0.6
Ebf1Q07802 Gm42941-201ENSMUST00000200347 1321 ntBASIC11.3□□□□□ -0.6
Ebf1Q07802 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf1Q07802 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ebf1Q07802 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.3□□□□□ -0.6
Ebf1Q07802 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf1Q07802 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf1Q07802 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf1Q07802 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf1Q07802 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.29□□□□□ -0.6
Ebf1Q07802 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.29□□□□□ -0.6
Ebf1Q07802 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.29□□□□□ -0.6
Ebf1Q07802 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf1Q07802 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.29□□□□□ -0.6
Ebf1Q07802 Gm10829-201ENSMUST00000202084 2988 ntBASIC11.29□□□□□ -0.6
Ebf1Q07802 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf1Q07802 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Ebf1Q07802 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf1Q07802 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf1Q07802 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf1Q07802 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.29□□□□□ -0.6
Ebf1Q07802 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.29□□□□□ -0.6
Ebf1Q07802 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf1Q07802 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.29□□□□□ -0.6
Ebf1Q07802 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf1Q07802 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf1Q07802 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf1Q07802 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC11.29□□□□□ -0.6
Ebf1Q07802 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ebf1Q07802 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf1Q07802 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC11.29□□□□□ -0.6
Ebf1Q07802 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf1Q07802 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.29□□□□□ -0.6
Ebf1Q07802 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf1Q07802 Gm29067-201ENSMUST00000190821 470 ntBASIC11.29□□□□□ -0.6
Ebf1Q07802 Gm5700-201ENSMUST00000191483 989 ntBASIC11.29□□□□□ -0.6
Ebf1Q07802 Gm42433-201ENSMUST00000196806 940 ntBASIC11.29□□□□□ -0.6
Ebf1Q07802 Gm5599-201ENSMUST00000209602 788 ntBASIC11.29□□□□□ -0.6
Ebf1Q07802 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf1Q07802 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ebf1Q07802 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf1Q07802 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf1Q07802 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf1Q07802 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.29□□□□□ -0.6
Ebf1Q07802 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.29□□□□□ -0.6
Ebf1Q07802 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf1Q07802 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf1Q07802 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ebf1Q07802 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.29□□□□□ -0.6
Ebf1Q07802 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.29□□□□□ -0.6
Ebf1Q07802 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf1Q07802 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf1Q07802 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf1Q07802 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf1Q07802 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf1Q07802 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf1Q07802 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf1Q07802 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf1Q07802 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.28□□□□□ -0.6
Ebf1Q07802 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf1Q07802 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf1Q07802 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.28□□□□□ -0.6
Ebf1Q07802 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.28□□□□□ -0.6
Ebf1Q07802 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.28□□□□□ -0.6
Ebf1Q07802 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.28□□□□□ -0.6
Ebf1Q07802 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf1Q07802 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf1Q07802 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf1Q07802 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.28□□□□□ -0.6
Ebf1Q07802 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ebf1Q07802 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.28□□□□□ -0.6
Ebf1Q07802 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf1Q07802 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf1Q07802 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf1Q07802 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf1Q07802 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf1Q07802 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf1Q07802 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf1Q07802 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ebf1Q07802 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf1Q07802 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Ebf1Q07802 Gm11619-201ENSMUST00000117474 237 ntBASIC11.28□□□□□ -0.6
Ebf1Q07802 Gm13981-201ENSMUST00000122360 447 ntBASIC11.28□□□□□ -0.6
Ebf1Q07802 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC11.28□□□□□ -0.6
Ebf1Q07802 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf1Q07802 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC11.28□□□□□ -0.6
Ebf1Q07802 Gm24992-201ENSMUST00000157412 130 ntBASIC11.28□□□□□ -0.6
Ebf1Q07802 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms