Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Rps28-205ENSMUST00000173844 382 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1sQ02789 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1sQ02789 4930515G16Rik-201ENSMUST00000199440 1256 ntBASIC13.74□□□□□ -0.21
Cacna1sQ02789 4930547H16Rik-201ENSMUST00000222281 907 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1sQ02789 AC154643.1-201ENSMUST00000225643 625 ntBASIC13.74□□□□□ -0.21
Cacna1sQ02789 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.74□□□□□ -0.21
Cacna1sQ02789 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1sQ02789 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1sQ02789 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Cacna1sQ02789 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1sQ02789 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1sQ02789 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1sQ02789 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.73□□□□□ -0.21
Cacna1sQ02789 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1sQ02789 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1sQ02789 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1sQ02789 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Cacna1sQ02789 1700048O20Rik-202ENSMUST00000214777 1900 ntTSL 3 BASIC13.73□□□□□ -0.21
Cacna1sQ02789 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1sQ02789 Ppp6c-205ENSMUST00000204701 1495 ntTSL 5 BASIC13.73□□□□□ -0.21
Cacna1sQ02789 Gm38309-201ENSMUST00000192063 1518 ntBASIC13.73□□□□□ -0.21
Cacna1sQ02789 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Cacna1sQ02789 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1sQ02789 Vegfa-204ENSMUST00000113520 654 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Cacna1sQ02789 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1sQ02789 Gm26913-201ENSMUST00000182391 732 ntBASIC13.73□□□□□ -0.21
Cacna1sQ02789 Gm8918-201ENSMUST00000190587 1087 ntBASIC13.73□□□□□ -0.21
Cacna1sQ02789 Gm5543-201ENSMUST00000193329 1091 ntBASIC13.73□□□□□ -0.21
Cacna1sQ02789 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1sQ02789 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1sQ02789 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1sQ02789 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1sQ02789 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1sQ02789 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1sQ02789 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1sQ02789 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1sQ02789 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1sQ02789 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1sQ02789 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1sQ02789 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1sQ02789 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cacna1sQ02789 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1sQ02789 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC13.72□□□□□ -0.21
Cacna1sQ02789 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1sQ02789 Mrps23-202ENSMUST00000107915 332 ntTSL 5 BASIC13.72□□□□□ -0.21
Cacna1sQ02789 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Cacna1sQ02789 Gm13071-201ENSMUST00000122237 376 ntBASIC13.72□□□□□ -0.21
Cacna1sQ02789 Cfap100-202ENSMUST00000127508 417 ntTSL 2 BASIC13.72□□□□□ -0.21
Cacna1sQ02789 Gm26356-201ENSMUST00000158217 283 ntBASIC13.72□□□□□ -0.21
Cacna1sQ02789 Gm6665-201ENSMUST00000165131 258 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Cacna1sQ02789 1700052H01Rik-201ENSMUST00000196142 717 ntTSL 3 BASIC13.72□□□□□ -0.21
Cacna1sQ02789 A430073D23Rik-201ENSMUST00000196262 665 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1sQ02789 Gm43833-201ENSMUST00000198828 293 ntBASIC13.72□□□□□ -0.21
Cacna1sQ02789 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1sQ02789 Gm29803-201ENSMUST00000205069 375 ntBASIC13.72□□□□□ -0.21
Cacna1sQ02789 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1sQ02789 Rpl15-ps3-201ENSMUST00000088480 615 ntBASIC13.72□□□□□ -0.21
Cacna1sQ02789 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1sQ02789 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC13.72□□□□□ -0.21
Cacna1sQ02789 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1sQ02789 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1sQ02789 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1sQ02789 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1sQ02789 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1sQ02789 Gm10344-201ENSMUST00000193498 1419 ntBASIC13.72□□□□□ -0.21
Cacna1sQ02789 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1sQ02789 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1sQ02789 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cacna1sQ02789 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.72□□□□□ -0.21
Cacna1sQ02789 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC13.72□□□□□ -0.21
Cacna1sQ02789 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Cacna1sQ02789 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Cacna1sQ02789 Rgs8-205ENSMUST00000111815 765 ntTSL 5 BASIC13.72□□□□□ -0.21
Cacna1sQ02789 Gm11701-201ENSMUST00000121277 1142 ntBASIC13.72□□□□□ -0.21
Cacna1sQ02789 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Cacna1sQ02789 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1sQ02789 1700063D05Rik-203ENSMUST00000191461 666 ntTSL 2 BASIC13.72□□□□□ -0.21
Cacna1sQ02789 Gm18646-201ENSMUST00000212240 1063 ntBASIC13.72□□□□□ -0.21
Cacna1sQ02789 Grb2-204ENSMUST00000106499 2333 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1sQ02789 AC134898.1-201ENSMUST00000223738 1836 ntBASIC13.72□□□□□ -0.21
Cacna1sQ02789 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cacna1sQ02789 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Cacna1sQ02789 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cacna1sQ02789 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cacna1sQ02789 Gm45895-201ENSMUST00000212248 1697 ntTSL 5 BASIC13.71□□□□□ -0.21
Cacna1sQ02789 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cacna1sQ02789 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cacna1sQ02789 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Cacna1sQ02789 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cacna1sQ02789 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cacna1sQ02789 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cacna1sQ02789 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cacna1sQ02789 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cacna1sQ02789 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Cacna1sQ02789 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC13.71□□□□□ -0.21
Cacna1sQ02789 Gm12362-201ENSMUST00000121986 342 ntBASIC13.71□□□□□ -0.21
Cacna1sQ02789 Gm3880-201ENSMUST00000122154 337 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Cacna1sQ02789 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Cacna1sQ02789 Gm27149-201ENSMUST00000184716 1266 ntBASIC13.71□□□□□ -0.21
Cacna1sQ02789 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms