Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cacna1aP97445 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cacna1aP97445 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Cacna1aP97445 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cacna1aP97445 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cacna1aP97445 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Cacna1aP97445 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cacna1aP97445 Acsl1-201ENSMUST00000034046 3897 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cacna1aP97445 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cacna1aP97445 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cacna1aP97445 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cacna1aP97445 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cacna1aP97445 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cacna1aP97445 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
Cacna1aP97445 Gm6441-201ENSMUST00000120983 696 ntBASIC10.3□□□□□ -0.76
Cacna1aP97445 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cacna1aP97445 Gm19013-201ENSMUST00000183895 1222 ntBASIC10.3□□□□□ -0.76
Cacna1aP97445 Gm19014-201ENSMUST00000184828 1189 ntBASIC10.3□□□□□ -0.76
Cacna1aP97445 Gm27316-201ENSMUST00000184884 277 ntBASIC10.3□□□□□ -0.76
Cacna1aP97445 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cacna1aP97445 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Cacna1aP97445 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Cacna1aP97445 Gm17541-201ENSMUST00000080062 525 ntBASIC10.3□□□□□ -0.76
Cacna1aP97445 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Cacna1aP97445 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Cacna1aP97445 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC10.3□□□□□ -0.76
Cacna1aP97445 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Cacna1aP97445 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cacna1aP97445 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cacna1aP97445 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
Cacna1aP97445 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cacna1aP97445 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
Cacna1aP97445 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cacna1aP97445 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.3□□□□□ -0.76
Cacna1aP97445 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cacna1aP97445 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cacna1aP97445 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cacna1aP97445 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cacna1aP97445 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cacna1aP97445 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cacna1aP97445 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC10.3□□□□□ -0.76
Cacna1aP97445 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC10.3□□□□□ -0.76
Cacna1aP97445 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cacna1aP97445 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cacna1aP97445 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cacna1aP97445 Gm18001-201ENSMUST00000212023 688 ntBASIC10.3□□□□□ -0.76
Cacna1aP97445 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.3□□□□□ -0.76
Cacna1aP97445 Gm7589-201ENSMUST00000085631 534 ntBASIC10.3□□□□□ -0.76
Cacna1aP97445 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC10.3□□□□□ -0.76
Cacna1aP97445 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cacna1aP97445 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cacna1aP97445 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cacna1aP97445 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cacna1aP97445 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cacna1aP97445 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cacna1aP97445 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cacna1aP97445 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.29□□□□□ -0.76
Cacna1aP97445 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
Cacna1aP97445 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Cacna1aP97445 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.29□□□□□ -0.76
Cacna1aP97445 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Cacna1aP97445 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Cacna1aP97445 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cacna1aP97445 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cacna1aP97445 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cacna1aP97445 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cacna1aP97445 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cacna1aP97445 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cacna1aP97445 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cacna1aP97445 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cacna1aP97445 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cacna1aP97445 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cacna1aP97445 Gm26313-201ENSMUST00000157770 308 ntBASIC10.29□□□□□ -0.76
Cacna1aP97445 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC10.29□□□□□ -0.76
Cacna1aP97445 Nsmce2-203ENSMUST00000227173 1122 ntBASIC10.29□□□□□ -0.76
Cacna1aP97445 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
Cacna1aP97445 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cacna1aP97445 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Cacna1aP97445 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC10.29□□□□□ -0.76
Cacna1aP97445 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cacna1aP97445 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cacna1aP97445 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cacna1aP97445 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cacna1aP97445 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cacna1aP97445 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cacna1aP97445 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cacna1aP97445 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cacna1aP97445 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cacna1aP97445 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cacna1aP97445 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Cacna1aP97445 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cacna1aP97445 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.29□□□□□ -0.76
Cacna1aP97445 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC10.29□□□□□ -0.76
Cacna1aP97445 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cacna1aP97445 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cacna1aP97445 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.29□□□□□ -0.76
Cacna1aP97445 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC10.29□□□□□ -0.76
Cacna1aP97445 Gm16228-201ENSMUST00000162286 809 ntBASIC10.29□□□□□ -0.76
Cacna1aP97445 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Cacna1aP97445 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms