Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ybx1P62960 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ybx1P62960 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Ybx1P62960 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.4□□□□□ -0.58
Ybx1P62960 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ybx1P62960 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ybx1P62960 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Ybx1P62960 Gm43371-201ENSMUST00000202838 1031 ntBASIC11.4□□□□□ -0.58
Ybx1P62960 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC11.4□□□□□ -0.58
Ybx1P62960 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC11.4□□□□□ -0.58
Ybx1P62960 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ybx1P62960 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ybx1P62960 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ybx1P62960 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ybx1P62960 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ybx1P62960 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ybx1P62960 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ybx1P62960 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ybx1P62960 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ybx1P62960 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ybx1P62960 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ybx1P62960 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Ybx1P62960 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Ybx1P62960 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ybx1P62960 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.4□□□□□ -0.59
Ybx1P62960 Gm38344-201ENSMUST00000195306 1353 ntBASIC11.4□□□□□ -0.59
Ybx1P62960 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Ybx1P62960 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ybx1P62960 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Ybx1P62960 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Ybx1P62960 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Ybx1P62960 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ybx1P62960 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ybx1P62960 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ybx1P62960 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ybx1P62960 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Ybx1P62960 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ybx1P62960 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Ybx1P62960 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ybx1P62960 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ybx1P62960 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ybx1P62960 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ybx1P62960 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Ybx1P62960 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.39□□□□□ -0.59
Ybx1P62960 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ybx1P62960 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ybx1P62960 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ybx1P62960 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ybx1P62960 Gm11380-201ENSMUST00000118067 560 ntBASIC11.39□□□□□ -0.59
Ybx1P62960 Gm11475-201ENSMUST00000118482 476 ntBASIC11.39□□□□□ -0.59
Ybx1P62960 Gm4917-201ENSMUST00000121452 650 ntBASIC11.39□□□□□ -0.59
Ybx1P62960 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Ybx1P62960 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Ybx1P62960 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ybx1P62960 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Ybx1P62960 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Ybx1P62960 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ybx1P62960 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Ybx1P62960 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Ybx1P62960 Gm43547-201ENSMUST00000197729 328 ntBASIC11.39□□□□□ -0.59
Ybx1P62960 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.39□□□□□ -0.59
Ybx1P62960 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ybx1P62960 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.39□□□□□ -0.59
Ybx1P62960 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC11.39□□□□□ -0.59
Ybx1P62960 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ybx1P62960 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ybx1P62960 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ybx1P62960 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ybx1P62960 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ybx1P62960 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ybx1P62960 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ybx1P62960 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Ybx1P62960 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ybx1P62960 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.39□□□□□ -0.59
Ybx1P62960 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ybx1P62960 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ybx1P62960 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ybx1P62960 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Ybx1P62960 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ybx1P62960 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ybx1P62960 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ybx1P62960 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC11.38□□□□□ -0.59
Ybx1P62960 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.38□□□□□ -0.59
Ybx1P62960 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ybx1P62960 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ybx1P62960 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ybx1P62960 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Ybx1P62960 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ybx1P62960 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ybx1P62960 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ybx1P62960 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC11.38□□□□□ -0.59
Ybx1P62960 Gm14113-201ENSMUST00000121399 976 ntBASIC11.38□□□□□ -0.59
Ybx1P62960 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ybx1P62960 Gm16165-201ENSMUST00000160140 795 ntBASIC11.38□□□□□ -0.59
Ybx1P62960 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC11.38□□□□□ -0.59
Ybx1P62960 Gm26119-201ENSMUST00000175601 104 ntBASIC11.38□□□□□ -0.59
Ybx1P62960 Gm27956-201ENSMUST00000175604 260 ntBASIC11.38□□□□□ -0.59
Ybx1P62960 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Ybx1P62960 Gm45094-201ENSMUST00000207013 617 ntBASIC11.38□□□□□ -0.59
Ybx1P62960 Gm14005-208ENSMUST00000223654 681 ntBASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms