Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Cdkn2bP55271 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdkn2bP55271 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdkn2bP55271 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdkn2bP55271 Spata33-207ENSMUST00000212760 4074 ntBASIC10.59□□□□□ -0.71
Cdkn2bP55271 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.59□□□□□ -0.71
Cdkn2bP55271 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdkn2bP55271 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdkn2bP55271 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC10.59□□□□□ -0.71
Cdkn2bP55271 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Cdkn2bP55271 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC10.58□□□□□ -0.71
Cdkn2bP55271 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.58□□□□□ -0.71
Cdkn2bP55271 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Gm18198-201ENSMUST00000204986 1551 ntBASIC10.58□□□□□ -0.72
Cdkn2bP55271 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Gm14058-201ENSMUST00000116082 735 ntBASIC10.58□□□□□ -0.72
Cdkn2bP55271 Gm16481-201ENSMUST00000119074 1227 ntBASIC10.58□□□□□ -0.72
Cdkn2bP55271 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Gm12570-201ENSMUST00000122047 1030 ntBASIC10.58□□□□□ -0.72
Cdkn2bP55271 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Gm4819-201ENSMUST00000182170 1009 ntBASIC10.58□□□□□ -0.72
Cdkn2bP55271 Gm7985-201ENSMUST00000183329 981 ntBASIC10.58□□□□□ -0.72
Cdkn2bP55271 Gm7255-201ENSMUST00000187371 908 ntBASIC10.58□□□□□ -0.72
Cdkn2bP55271 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Gm43916-201ENSMUST00000205062 967 ntBASIC10.58□□□□□ -0.72
Cdkn2bP55271 Gm31941-201ENSMUST00000209689 350 ntBASIC10.58□□□□□ -0.72
Cdkn2bP55271 Gm5369-201ENSMUST00000217499 588 ntBASIC10.58□□□□□ -0.72
Cdkn2bP55271 Abhd11os-203ENSMUST00000222613 363 ntBASIC10.58□□□□□ -0.72
Cdkn2bP55271 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.58□□□□□ -0.72
Cdkn2bP55271 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdkn2bP55271 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Gm5739-201ENSMUST00000208601 1703 ntBASIC10.58□□□□□ -0.72
Cdkn2bP55271 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Cdkn2bP55271 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdkn2bP55271 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdkn2bP55271 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdkn2bP55271 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdkn2bP55271 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.57□□□□□ -0.72
Cdkn2bP55271 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdkn2bP55271 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdkn2bP55271 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Cdkn2bP55271 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdkn2bP55271 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdkn2bP55271 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC10.57□□□□□ -0.72
Cdkn2bP55271 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdkn2bP55271 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC10.57□□□□□ -0.72
Cdkn2bP55271 Gm6580-201ENSMUST00000117504 1357 ntBASIC10.57□□□□□ -0.72
Cdkn2bP55271 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdkn2bP55271 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdkn2bP55271 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Cdkn2bP55271 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdkn2bP55271 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
Cdkn2bP55271 Gm11450-201ENSMUST00000121144 333 ntBASIC10.57□□□□□ -0.72
Cdkn2bP55271 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdkn2bP55271 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC10.57□□□□□ -0.72
Cdkn2bP55271 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10.57□□□□□ -0.72
Cdkn2bP55271 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.57□□□□□ -0.72
Cdkn2bP55271 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10.57□□□□□ -0.72
Cdkn2bP55271 Gm27552-201ENSMUST00000183351 62 ntBASIC10.57□□□□□ -0.72
Cdkn2bP55271 Gm27844-201ENSMUST00000183613 62 ntBASIC10.57□□□□□ -0.72
Cdkn2bP55271 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC10.57□□□□□ -0.72
Cdkn2bP55271 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC10.57□□□□□ -0.72
Cdkn2bP55271 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdkn2bP55271 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC10.57□□□□□ -0.72
Cdkn2bP55271 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdkn2bP55271 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC10.57□□□□□ -0.72
Cdkn2bP55271 CT573034.1-201ENSMUST00000222983 313 ntBASIC10.57□□□□□ -0.72
Cdkn2bP55271 AC137950.2-201ENSMUST00000227127 1089 ntBASIC10.57□□□□□ -0.72
Cdkn2bP55271 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdkn2bP55271 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms