Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.84□□□□□ -0.51
NrlP54846 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NrlP54846 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NrlP54846 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NrlP54846 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC11.84□□□□□ -0.51
NrlP54846 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.84□□□□□ -0.51
NrlP54846 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
NrlP54846 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.83□□□□□ -0.51
NrlP54846 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NrlP54846 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NrlP54846 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.83□□□□□ -0.52
NrlP54846 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NrlP54846 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NrlP54846 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
NrlP54846 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NrlP54846 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NrlP54846 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NrlP54846 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
NrlP54846 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NrlP54846 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NrlP54846 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NrlP54846 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NrlP54846 Gm22937-201ENSMUST00000103954 131 ntBASIC11.83□□□□□ -0.52
NrlP54846 Gm15617-201ENSMUST00000118973 771 ntBASIC11.83□□□□□ -0.52
NrlP54846 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NrlP54846 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC11.83□□□□□ -0.52
NrlP54846 Gm12906-201ENSMUST00000154610 441 ntBASIC11.83□□□□□ -0.52
NrlP54846 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC11.83□□□□□ -0.52
NrlP54846 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NrlP54846 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NrlP54846 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.83□□□□□ -0.52
NrlP54846 Gm43249-201ENSMUST00000200464 458 ntBASIC11.83□□□□□ -0.52
NrlP54846 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC11.83□□□□□ -0.52
NrlP54846 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NrlP54846 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC11.83□□□□□ -0.52
NrlP54846 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC11.83□□□□□ -0.52
NrlP54846 AC162932.1-201ENSMUST00000219209 872 ntBASIC11.83□□□□□ -0.52
NrlP54846 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NrlP54846 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NrlP54846 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NrlP54846 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NrlP54846 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NrlP54846 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NrlP54846 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NrlP54846 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NrlP54846 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
NrlP54846 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC11.83□□□□□ -0.52
NrlP54846 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NrlP54846 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NrlP54846 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
NrlP54846 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NrlP54846 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NrlP54846 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NrlP54846 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NrlP54846 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
NrlP54846 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
NrlP54846 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
NrlP54846 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.83□□□□□ -0.52
NrlP54846 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NrlP54846 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
NrlP54846 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
NrlP54846 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC11.82□□□□□ -0.52
NrlP54846 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NrlP54846 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.82□□□□□ -0.52
NrlP54846 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NrlP54846 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NrlP54846 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
NrlP54846 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NrlP54846 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC11.82□□□□□ -0.52
NrlP54846 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
NrlP54846 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
NrlP54846 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
NrlP54846 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
NrlP54846 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC11.82□□□□□ -0.52
NrlP54846 Gm11993-201ENSMUST00000121861 820 ntBASIC11.82□□□□□ -0.52
NrlP54846 Gm11434-201ENSMUST00000122379 629 ntBASIC11.82□□□□□ -0.52
NrlP54846 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.82□□□□□ -0.52
NrlP54846 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
NrlP54846 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.82□□□□□ -0.52
NrlP54846 Trav11n-201ENSMUST00000200113 343 ntBASIC11.82□□□□□ -0.52
NrlP54846 Gm43969-201ENSMUST00000204833 535 ntBASIC11.82□□□□□ -0.52
NrlP54846 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC11.82□□□□□ -0.52
NrlP54846 Olfr692-202ENSMUST00000217827 1126 ntBASIC11.82□□□□□ -0.52
NrlP54846 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.82□□□□□ -0.52
NrlP54846 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NrlP54846 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
NrlP54846 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NrlP54846 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
NrlP54846 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NrlP54846 Gm42499-201ENSMUST00000196193 1412 ntBASIC11.82□□□□□ -0.52
NrlP54846 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NrlP54846 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
NrlP54846 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
NrlP54846 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NrlP54846 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NrlP54846 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NrlP54846 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
NrlP54846 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
NrlP54846 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NrlP54846 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 105.6 ms