Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC13.29□□□□□ -0.28
LtbrP50284 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LtbrP50284 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC13.29□□□□□ -0.28
LtbrP50284 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC13.29□□□□□ -0.28
LtbrP50284 AC173482.2-201ENSMUST00000224044 750 ntBASIC13.29□□□□□ -0.28
LtbrP50284 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LtbrP50284 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
LtbrP50284 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
LtbrP50284 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LtbrP50284 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LtbrP50284 Gm9415-201ENSMUST00000200462 1321 ntBASIC13.29□□□□□ -0.28
LtbrP50284 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LtbrP50284 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LtbrP50284 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LtbrP50284 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LtbrP50284 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LtbrP50284 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LtbrP50284 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LtbrP50284 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LtbrP50284 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LtbrP50284 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LtbrP50284 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LtbrP50284 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LtbrP50284 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LtbrP50284 Gm45776-201ENSMUST00000212366 1522 ntBASIC13.29□□□□□ -0.28
LtbrP50284 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LtbrP50284 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LtbrP50284 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LtbrP50284 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC13.28□□□□□ -0.28
LtbrP50284 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC13.28□□□□□ -0.28
LtbrP50284 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC13.28□□□□□ -0.28
LtbrP50284 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC13.28□□□□□ -0.28
LtbrP50284 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LtbrP50284 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LtbrP50284 Gm44237-201ENSMUST00000205183 936 ntBASIC13.28□□□□□ -0.28
LtbrP50284 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC13.28□□□□□ -0.28
LtbrP50284 Gm8255-201ENSMUST00000218693 305 ntBASIC13.28□□□□□ -0.28
LtbrP50284 CT025689.1-201ENSMUST00000225214 283 ntBASIC13.28□□□□□ -0.28
LtbrP50284 Capsl-202ENSMUST00000226688 739 ntBASIC13.28□□□□□ -0.28
LtbrP50284 AC242269.1-201ENSMUST00000227020 741 ntBASIC13.28□□□□□ -0.28
LtbrP50284 Gm4978-201ENSMUST00000071565 801 ntBASIC13.28□□□□□ -0.28
LtbrP50284 Rps3a2-201ENSMUST00000074245 792 ntBASIC13.28□□□□□ -0.28
LtbrP50284 Rps3a3-201ENSMUST00000074680 795 ntBASIC13.28□□□□□ -0.28
LtbrP50284 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
LtbrP50284 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LtbrP50284 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LtbrP50284 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
LtbrP50284 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LtbrP50284 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LtbrP50284 AC159810.1-201ENSMUST00000214838 1480 ntBASIC13.28□□□□□ -0.28
LtbrP50284 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
LtbrP50284 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LtbrP50284 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LtbrP50284 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
LtbrP50284 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
LtbrP50284 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LtbrP50284 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LtbrP50284 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LtbrP50284 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LtbrP50284 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
LtbrP50284 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LtbrP50284 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LtbrP50284 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
LtbrP50284 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LtbrP50284 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
LtbrP50284 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.27□□□□□ -0.29
LtbrP50284 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
LtbrP50284 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
LtbrP50284 Gm23595-201ENSMUST00000104306 130 ntBASIC13.27□□□□□ -0.29
LtbrP50284 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC13.27□□□□□ -0.29
LtbrP50284 Gm12418-201ENSMUST00000118116 942 ntBASIC13.27□□□□□ -0.29
LtbrP50284 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
LtbrP50284 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
LtbrP50284 Gm13827-201ENSMUST00000148801 372 ntBASIC13.27□□□□□ -0.29
LtbrP50284 Gm25569-201ENSMUST00000157175 131 ntBASIC13.27□□□□□ -0.29
LtbrP50284 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LtbrP50284 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LtbrP50284 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LtbrP50284 Mir7035-201ENSMUST00000184713 82 ntBASIC13.27□□□□□ -0.29
LtbrP50284 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
LtbrP50284 Gm33707-201ENSMUST00000195135 569 ntBASIC13.27□□□□□ -0.29
LtbrP50284 Gm8234-201ENSMUST00000198523 1107 ntBASIC13.27□□□□□ -0.29
LtbrP50284 Gm42588-201ENSMUST00000200538 1297 ntBASIC13.27□□□□□ -0.29
LtbrP50284 Gm5996-201ENSMUST00000211110 718 ntBASIC13.27□□□□□ -0.29
LtbrP50284 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC13.27□□□□□ -0.29
LtbrP50284 RMST_1.1-211ENSMUST00000219726 783 ntTSL 3 BASIC13.27□□□□□ -0.29
LtbrP50284 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
LtbrP50284 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
LtbrP50284 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
LtbrP50284 Gm10617-201ENSMUST00000098368 1172 ntBASIC13.27□□□□□ -0.29
LtbrP50284 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LtbrP50284 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LtbrP50284 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LtbrP50284 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LtbrP50284 Gm14005-210ENSMUST00000225087 1413 ntBASIC13.27□□□□□ -0.29
LtbrP50284 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
LtbrP50284 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LtbrP50284 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC13.27□□□□□ -0.29
LtbrP50284 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LtbrP50284 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms