Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
TgfaP48030 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TgfaP48030 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
TgfaP48030 Gm27194-201ENSMUST00000175753 2936 ntBASIC9.7□□□□□ -0.86
TgfaP48030 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
TgfaP48030 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TgfaP48030 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
TgfaP48030 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
TgfaP48030 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
TgfaP48030 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
TgfaP48030 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TgfaP48030 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
TgfaP48030 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TgfaP48030 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
TgfaP48030 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC9.7□□□□□ -0.86
TgfaP48030 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
TgfaP48030 Gm43773-201ENSMUST00000198548 2162 ntBASIC9.7□□□□□ -0.86
TgfaP48030 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
TgfaP48030 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
TgfaP48030 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TgfaP48030 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC9.7□□□□□ -0.86
TgfaP48030 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
TgfaP48030 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
TgfaP48030 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC9.69□□□□□ -0.86
TgfaP48030 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
TgfaP48030 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
TgfaP48030 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 Gm25288-201ENSMUST00000122800 265 ntBASIC9.69□□□□□ -0.86
TgfaP48030 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC9.69□□□□□ -0.86
TgfaP48030 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 Gm26313-201ENSMUST00000157770 308 ntBASIC9.69□□□□□ -0.86
TgfaP48030 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC9.69□□□□□ -0.86
TgfaP48030 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
TgfaP48030 Cd9-ps-201ENSMUST00000174687 650 ntBASIC9.69□□□□□ -0.86
TgfaP48030 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
TgfaP48030 Mir6387-201ENSMUST00000184042 108 ntBASIC9.69□□□□□ -0.86
TgfaP48030 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC9.69□□□□□ -0.86
TgfaP48030 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC9.69□□□□□ -0.86
TgfaP48030 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 Gm6518-201ENSMUST00000208450 342 ntBASIC9.69□□□□□ -0.86
TgfaP48030 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC9.69□□□□□ -0.86
TgfaP48030 AC134793.1-202ENSMUST00000227444 803 ntBASIC9.69□□□□□ -0.86
TgfaP48030 AC154589.2-201ENSMUST00000228847 251 ntBASIC9.69□□□□□ -0.86
TgfaP48030 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
TgfaP48030 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
TgfaP48030 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC9.69□□□□□ -0.86
TgfaP48030 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
TgfaP48030 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
TgfaP48030 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
TgfaP48030 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TgfaP48030 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TgfaP48030 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TgfaP48030 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
TgfaP48030 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TgfaP48030 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
TgfaP48030 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TgfaP48030 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC9.68□□□□□ -0.86
TgfaP48030 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
TgfaP48030 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TgfaP48030 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TgfaP48030 Gm37122-201ENSMUST00000195313 1567 ntBASIC9.68□□□□□ -0.86
TgfaP48030 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TgfaP48030 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
TgfaP48030 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
TgfaP48030 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
TgfaP48030 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms