Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm4868-201ENSMUST00000164138 789 ntBASIC10.99□□□□□ -0.65
Sox18P43680 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Sox18P43680 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox18P43680 Gm27956-201ENSMUST00000175604 260 ntBASIC10.99□□□□□ -0.65
Sox18P43680 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Sox18P43680 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox18P43680 Mir6953-201ENSMUST00000184745 68 ntBASIC10.99□□□□□ -0.65
Sox18P43680 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox18P43680 Gm21301-201ENSMUST00000189476 699 ntBASIC10.99□□□□□ -0.65
Sox18P43680 Gm37337-201ENSMUST00000192601 993 ntBASIC10.99□□□□□ -0.65
Sox18P43680 Gm37365-201ENSMUST00000193109 409 ntBASIC10.99□□□□□ -0.65
Sox18P43680 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC10.99□□□□□ -0.65
Sox18P43680 Gm8197-202ENSMUST00000193422 934 ntBASIC10.99□□□□□ -0.65
Sox18P43680 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.99□□□□□ -0.65
Sox18P43680 Gm7939-201ENSMUST00000201233 1050 ntBASIC10.99□□□□□ -0.65
Sox18P43680 Gm7504-201ENSMUST00000201449 424 ntBASIC10.99□□□□□ -0.65
Sox18P43680 BC080696-201ENSMUST00000202858 1218 ntBASIC10.99□□□□□ -0.65
Sox18P43680 Gm2448-201ENSMUST00000207080 559 ntBASIC10.99□□□□□ -0.65
Sox18P43680 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.99□□□□□ -0.65
Sox18P43680 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC10.99□□□□□ -0.65
Sox18P43680 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC10.99□□□□□ -0.65
Sox18P43680 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC10.99□□□□□ -0.65
Sox18P43680 CT030170.2-201ENSMUST00000223267 126 ntBASIC10.99□□□□□ -0.65
Sox18P43680 AC151902.1-201ENSMUST00000227800 375 ntBASIC10.99□□□□□ -0.65
Sox18P43680 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox18P43680 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Sox18P43680 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Sox18P43680 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox18P43680 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Sox18P43680 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox18P43680 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox18P43680 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox18P43680 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Sox18P43680 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox18P43680 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox18P43680 Gm7647-201ENSMUST00000200996 1389 ntBASIC10.99□□□□□ -0.65
Sox18P43680 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox18P43680 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC10.99□□□□□ -0.65
Sox18P43680 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox18P43680 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox18P43680 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Sox18P43680 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox18P43680 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Sox18P43680 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Sox18P43680 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox18P43680 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox18P43680 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.98□□□□□ -0.65
Sox18P43680 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox18P43680 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox18P43680 Gm25414-201ENSMUST00000101814 107 ntBASIC10.98□□□□□ -0.65
Sox18P43680 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox18P43680 Gm13094-201ENSMUST00000117930 409 ntBASIC10.98□□□□□ -0.65
Sox18P43680 Gm13422-201ENSMUST00000118834 504 ntBASIC10.98□□□□□ -0.65
Sox18P43680 Gm12998-201ENSMUST00000122445 789 ntBASIC10.98□□□□□ -0.65
Sox18P43680 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC10.98□□□□□ -0.65
Sox18P43680 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC10.98□□□□□ -0.65
Sox18P43680 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox18P43680 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox18P43680 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox18P43680 Gm17709-201ENSMUST00000174536 1096 ntBASIC10.98□□□□□ -0.65
Sox18P43680 Gm22906-201ENSMUST00000175191 250 ntBASIC10.98□□□□□ -0.65
Sox18P43680 V1rg10-201ENSMUST00000183378 937 ntBASIC10.98□□□□□ -0.65
Sox18P43680 Gm28937-201ENSMUST00000185413 695 ntBASIC10.98□□□□□ -0.65
Sox18P43680 Gm29400-201ENSMUST00000187208 695 ntBASIC10.98□□□□□ -0.65
Sox18P43680 Gm28662-201ENSMUST00000188446 695 ntBASIC10.98□□□□□ -0.65
Sox18P43680 Gm28251-201ENSMUST00000188835 695 ntBASIC10.98□□□□□ -0.65
Sox18P43680 Gm6606-201ENSMUST00000193613 947 ntBASIC10.98□□□□□ -0.65
Sox18P43680 Gm37318-201ENSMUST00000194325 695 ntBASIC10.98□□□□□ -0.65
Sox18P43680 Gm38017-201ENSMUST00000194768 695 ntBASIC10.98□□□□□ -0.65
Sox18P43680 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC10.98□□□□□ -0.65
Sox18P43680 Gm37287-201ENSMUST00000195449 695 ntBASIC10.98□□□□□ -0.65
Sox18P43680 Gm37793-201ENSMUST00000195548 695 ntBASIC10.98□□□□□ -0.65
Sox18P43680 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
Sox18P43680 Gm17931-201ENSMUST00000208132 634 ntBASIC10.98□□□□□ -0.65
Sox18P43680 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC10.98□□□□□ -0.65
Sox18P43680 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox18P43680 Gm5468-202ENSMUST00000227851 682 ntBASIC10.98□□□□□ -0.65
Sox18P43680 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Sox18P43680 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Sox18P43680 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox18P43680 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox18P43680 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox18P43680 CT030185.2-201ENSMUST00000222614 1310 ntBASIC10.98□□□□□ -0.65
Sox18P43680 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC10.98□□□□□ -0.65
Sox18P43680 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox18P43680 AC132384.4-201ENSMUST00000220343 1397 ntBASIC10.98□□□□□ -0.65
Sox18P43680 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox18P43680 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.98□□□□□ -0.65
Sox18P43680 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Sox18P43680 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.98□□□□□ -0.65
Sox18P43680 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox18P43680 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Sox18P43680 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Sox18P43680 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox18P43680 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.98□□□□□ -0.65
Sox18P43680 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox18P43680 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox18P43680 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox18P43680 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Sox18P43680 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms