Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.57□□□□□ -0.72
Cdx2P43241 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx2P43241 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.57□□□□□ -0.72
Cdx2P43241 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Cdx2P43241 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx2P43241 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx2P43241 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.57□□□□□ -0.72
Cdx2P43241 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Cdx2P43241 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Cdx2P43241 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx2P43241 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx2P43241 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Cdx2P43241 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
Cdx2P43241 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.57□□□□□ -0.72
Cdx2P43241 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx2P43241 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx2P43241 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Cdx2P43241 Gm19027-201ENSMUST00000187291 1355 ntBASIC10.57□□□□□ -0.72
Cdx2P43241 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx2P43241 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx2P43241 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx2P43241 Gm22495-201ENSMUST00000104492 126 ntBASIC10.57□□□□□ -0.72
Cdx2P43241 Mir1249-201ENSMUST00000116791 98 ntBASIC10.57□□□□□ -0.72
Cdx2P43241 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC10.57□□□□□ -0.72
Cdx2P43241 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.57□□□□□ -0.72
Cdx2P43241 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx2P43241 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC10.57□□□□□ -0.72
Cdx2P43241 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC10.57□□□□□ -0.72
Cdx2P43241 Gm5210-201ENSMUST00000182150 1010 ntBASIC10.57□□□□□ -0.72
Cdx2P43241 Mir6973a-201ENSMUST00000183646 78 ntBASIC10.57□□□□□ -0.72
Cdx2P43241 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx2P43241 CT030195.2-201ENSMUST00000226074 1286 ntBASIC10.57□□□□□ -0.72
Cdx2P43241 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx2P43241 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx2P43241 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Cdx2P43241 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Cdx2P43241 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.57□□□□□ -0.72
Cdx2P43241 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx2P43241 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx2P43241 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Cdx2P43241 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx2P43241 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx2P43241 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx2P43241 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx2P43241 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx2P43241 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.57□□□□□ -0.72
Cdx2P43241 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx2P43241 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx2P43241 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx2P43241 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdx2P43241 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Cdx2P43241 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Cdx2P43241 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx2P43241 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx2P43241 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx2P43241 Gm42858-201ENSMUST00000202512 1704 ntBASIC10.56□□□□□ -0.72
Cdx2P43241 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx2P43241 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC10.56□□□□□ -0.72
Cdx2P43241 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx2P43241 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC10.56□□□□□ -0.72
Cdx2P43241 Gm16288-201ENSMUST00000137940 367 ntBASIC10.56□□□□□ -0.72
Cdx2P43241 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC10.56□□□□□ -0.72
Cdx2P43241 Gm20493-201ENSMUST00000173706 213 ntBASIC10.56□□□□□ -0.72
Cdx2P43241 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC10.56□□□□□ -0.72
Cdx2P43241 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC10.56□□□□□ -0.72
Cdx2P43241 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx2P43241 Gm33080-201ENSMUST00000205429 172 ntBASIC10.56□□□□□ -0.72
Cdx2P43241 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC10.56□□□□□ -0.72
Cdx2P43241 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx2P43241 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx2P43241 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Cdx2P43241 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Cdx2P43241 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx2P43241 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx2P43241 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx2P43241 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx2P43241 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx2P43241 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx2P43241 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx2P43241 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Cdx2P43241 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Cdx2P43241 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx2P43241 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx2P43241 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdx2P43241 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx2P43241 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx2P43241 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx2P43241 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx2P43241 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx2P43241 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx2P43241 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx2P43241 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx2P43241 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC10.55□□□□□ -0.72
Cdx2P43241 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC10.55□□□□□ -0.72
Cdx2P43241 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Cdx2P43241 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx2P43241 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Cdx2P43241 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdx2P43241 Gm5159-201ENSMUST00000212733 1652 ntBASIC10.55□□□□□ -0.72
Cdx2P43241 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms