Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 AC124581.2-201ENSMUST00000225459 282 ntBASIC16.26■□□□□ 0.19
Chd1P40201 Dbil5-201ENSMUST00000040806 581 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chd1P40201 Sh2d1a-201ENSMUST00000005839 883 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chd1P40201 Slc51b-201ENSMUST00000065894 709 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chd1P40201 Vmn1r199-201ENSMUST00000091732 1104 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
Chd1P40201 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Chd1P40201 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chd1P40201 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chd1P40201 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chd1P40201 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Chd1P40201 Ndufa9-203ENSMUST00000205002 1445 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chd1P40201 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd1P40201 Gm5432-201ENSMUST00000180759 1670 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chd1P40201 Amn1-202ENSMUST00000111535 1457 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Chd1P40201 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chd1P40201 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd1P40201 Gm14676-201ENSMUST00000117722 858 ntBASIC16.25■□□□□ 0.19
Chd1P40201 Gm16365-201ENSMUST00000122987 629 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chd1P40201 1700019E08Rik-201ENSMUST00000134308 424 ntTSL 5 BASIC16.25■□□□□ 0.19
Chd1P40201 5031425E22Rik-203ENSMUST00000188328 828 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chd1P40201 H2al1a-201ENSMUST00000188439 501 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Chd1P40201 Fam162b-201ENSMUST00000020064 646 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd1P40201 Gm44709-201ENSMUST00000207649 448 ntTSL 5 BASIC16.25■□□□□ 0.19
Chd1P40201 CT025579.2-201ENSMUST00000225280 816 ntBASIC16.25■□□□□ 0.19
Chd1P40201 Cks2-201ENSMUST00000075853 692 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd1P40201 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC16.25■□□□□ 0.19
Chd1P40201 AC187103.1-202ENSMUST00000223904 1536 ntBASIC16.25■□□□□ 0.19
Chd1P40201 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd1P40201 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd1P40201 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd1P40201 Entpd5-206ENSMUST00000122194 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd1P40201 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Chd1P40201 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd1P40201 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC16.25■□□□□ 0.19
Chd1P40201 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd1P40201 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chd1P40201 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd1P40201 Gm16131-201ENSMUST00000131007 659 ntTSL 3 BASIC16.25■□□□□ 0.19
Chd1P40201 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC16.25■□□□□ 0.19
Chd1P40201 Gm16350-201ENSMUST00000162958 446 ntTSL 2 BASIC16.25■□□□□ 0.19
Chd1P40201 Gm37141-201ENSMUST00000191938 422 ntBASIC16.25■□□□□ 0.19
Chd1P40201 Gm19566-201ENSMUST00000199576 610 ntBASIC16.25■□□□□ 0.19
Chd1P40201 Gm6439-201ENSMUST00000199849 862 ntBASIC16.25■□□□□ 0.19
Chd1P40201 Gm32856-202ENSMUST00000212180 1134 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chd1P40201 AC107851.1-201ENSMUST00000215982 417 ntTSL 2 BASIC16.25■□□□□ 0.19
Chd1P40201 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd1P40201 Ccr8-201ENSMUST00000048777 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd1P40201 Gm4953-201ENSMUST00000077309 483 ntBASIC16.25■□□□□ 0.19
Chd1P40201 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd1P40201 AC167565.1-201ENSMUST00000226980 1833 ntBASIC16.25■□□□□ 0.19
Chd1P40201 Btn2a2-204ENSMUST00000223877 2109 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Chd1P40201 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC16.24■□□□□ 0.19
Chd1P40201 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd1P40201 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd1P40201 Gm7964-201ENSMUST00000051522 1378 ntBASIC16.24■□□□□ 0.19
Chd1P40201 5830473C10Rik-202ENSMUST00000200765 1691 ntTSL 5 BASIC16.24■□□□□ 0.19
Chd1P40201 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd1P40201 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd1P40201 Pfkfb3-215ENSMUST00000183869 1478 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chd1P40201 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd1P40201 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC16.24■□□□□ 0.19
Chd1P40201 Gm28624-201ENSMUST00000186430 2131 ntBASIC16.24■□□□□ 0.19
Chd1P40201 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd1P40201 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Chd1P40201 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Chd1P40201 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd1P40201 Gm2237-201ENSMUST00000112595 471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd1P40201 Rpsa-ps11-201ENSMUST00000118446 889 ntBASIC16.24■□□□□ 0.19
Chd1P40201 Gm22481-201ENSMUST00000122562 192 ntBASIC16.24■□□□□ 0.19
Chd1P40201 Gm44920-201ENSMUST00000206503 746 ntTSL 5 BASIC16.24■□□□□ 0.19
Chd1P40201 Arl15-202ENSMUST00000224068 1002 ntBASIC16.24■□□□□ 0.19
Chd1P40201 Proca1-202ENSMUST00000078099 1254 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd1P40201 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd1P40201 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd1P40201 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Chd1P40201 Foxr1-201ENSMUST00000098837 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd1P40201 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chd1P40201 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd1P40201 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd1P40201 Rnf183-202ENSMUST00000107454 1407 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Chd1P40201 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd1P40201 Gm37269-201ENSMUST00000193906 1891 ntBASIC16.23■□□□□ 0.19
Chd1P40201 Gm42962-201ENSMUST00000201966 2325 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chd1P40201 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd1P40201 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd1P40201 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chd1P40201 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chd1P40201 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chd1P40201 Gm13975-201ENSMUST00000119253 782 ntBASIC16.23■□□□□ 0.19
Chd1P40201 Arpp19-207ENSMUST00000169188 216 ntTSL 5 BASIC16.23■□□□□ 0.19
Chd1P40201 Gm30619-201ENSMUST00000213962 686 ntBASIC16.23■□□□□ 0.19
Chd1P40201 Olfr371-202ENSMUST00000218663 1162 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Chd1P40201 Gm18119-201ENSMUST00000219972 616 ntBASIC16.23■□□□□ 0.19
Chd1P40201 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd1P40201 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd1P40201 Gm6682-201ENSMUST00000169666 1346 ntBASIC16.23■□□□□ 0.19
Chd1P40201 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd1P40201 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd1P40201 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd1P40201 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms