Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Gm8899-201ENSMUST00000214635 1332 ntBASIC9.71□□□□□ -0.86
Upk2P38575 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Upk2P38575 Gm5308-201ENSMUST00000196752 1354 ntBASIC9.71□□□□□ -0.86
Upk2P38575 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC9.71□□□□□ -0.86
Upk2P38575 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC9.71□□□□□ -0.86
Upk2P38575 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Upk2P38575 Gm43289-201ENSMUST00000200537 1475 ntBASIC9.71□□□□□ -0.86
Upk2P38575 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Upk2P38575 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Upk2P38575 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC9.71□□□□□ -0.86
Upk2P38575 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Upk2P38575 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC9.71□□□□□ -0.86
Upk2P38575 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Upk2P38575 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Upk2P38575 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Upk2P38575 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Upk2P38575 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Upk2P38575 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Upk2P38575 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Upk2P38575 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Upk2P38575 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Upk2P38575 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Upk2P38575 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Upk2P38575 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Upk2P38575 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Upk2P38575 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Upk2P38575 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Upk2P38575 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC9.7□□□□□ -0.86
Upk2P38575 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Upk2P38575 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Upk2P38575 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Upk2P38575 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Upk2P38575 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Upk2P38575 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Upk2P38575 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC9.7□□□□□ -0.86
Upk2P38575 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Upk2P38575 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC9.7□□□□□ -0.86
Upk2P38575 Gm13284-201ENSMUST00000121020 547 ntBASIC9.7□□□□□ -0.86
Upk2P38575 Mir1896-201ENSMUST00000122641 81 ntBASIC9.7□□□□□ -0.86
Upk2P38575 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Upk2P38575 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Upk2P38575 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Upk2P38575 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Upk2P38575 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC9.7□□□□□ -0.86
Upk2P38575 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Upk2P38575 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Upk2P38575 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Upk2P38575 Gm7467-201ENSMUST00000185173 652 ntBASIC9.7□□□□□ -0.86
Upk2P38575 Gm37597-201ENSMUST00000191853 382 ntBASIC9.7□□□□□ -0.86
Upk2P38575 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC9.7□□□□□ -0.86
Upk2P38575 Gm43163-201ENSMUST00000196571 442 ntBASIC9.7□□□□□ -0.86
Upk2P38575 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC9.7□□□□□ -0.86
Upk2P38575 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC9.7□□□□□ -0.86
Upk2P38575 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Upk2P38575 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC9.7□□□□□ -0.86
Upk2P38575 AC165260.2-203ENSMUST00000224237 336 ntBASIC9.7□□□□□ -0.86
Upk2P38575 AC159103.1-201ENSMUST00000228325 429 ntBASIC9.7□□□□□ -0.86
Upk2P38575 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC9.7□□□□□ -0.86
Upk2P38575 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Upk2P38575 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
Upk2P38575 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Upk2P38575 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Upk2P38575 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Upk2P38575 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Upk2P38575 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC9.7□□□□□ -0.86
Upk2P38575 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Upk2P38575 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC9.7□□□□□ -0.86
Upk2P38575 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Upk2P38575 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Upk2P38575 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Upk2P38575 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC9.7□□□□□ -0.86
Upk2P38575 AC207128.2-201ENSMUST00000223708 1924 ntBASIC9.7□□□□□ -0.86
Upk2P38575 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Upk2P38575 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Upk2P38575 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Upk2P38575 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Upk2P38575 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Upk2P38575 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC9.7□□□□□ -0.86
Upk2P38575 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC9.69□□□□□ -0.86
Upk2P38575 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Upk2P38575 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Upk2P38575 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Upk2P38575 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Upk2P38575 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC9.69□□□□□ -0.86
Upk2P38575 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Upk2P38575 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Upk2P38575 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Upk2P38575 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Upk2P38575 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Upk2P38575 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Upk2P38575 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC9.69□□□□□ -0.86
Upk2P38575 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC9.69□□□□□ -0.86
Upk2P38575 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC9.69□□□□□ -0.86
Upk2P38575 Gm11246-201ENSMUST00000120880 345 ntBASIC9.69□□□□□ -0.86
Upk2P38575 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Upk2P38575 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC9.69□□□□□ -0.86
Upk2P38575 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Upk2P38575 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Upk2P38575 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC9.69□□□□□ -0.86
Upk2P38575 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms