Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Cfap61-202ENSMUST00000118002 3230 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 Gm12286-201ENSMUST00000119246 1002 ntBASIC9.01□□□□□ -0.97
Cdx1P18111 Gm11331-201ENSMUST00000119764 288 ntBASIC9.01□□□□□ -0.97
Cdx1P18111 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC9.01□□□□□ -0.97
Cdx1P18111 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC9.01□□□□□ -0.97
Cdx1P18111 Gm17040-202ENSMUST00000170597 889 ntBASIC9.01□□□□□ -0.97
Cdx1P18111 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC9.01□□□□□ -0.97
Cdx1P18111 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 P2ry14-206ENSMUST00000197841 2476 ntTSL 5 BASIC9.01□□□□□ -0.97
Cdx1P18111 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC9.01□□□□□ -0.97
Cdx1P18111 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC9.01□□□□□ -0.97
Cdx1P18111 Gm19187-201ENSMUST00000206781 892 ntBASIC9.01□□□□□ -0.97
Cdx1P18111 Gm45598-202ENSMUST00000210719 986 ntBASIC9.01□□□□□ -0.97
Cdx1P18111 Gm8959-201ENSMUST00000213150 571 ntBASIC9.01□□□□□ -0.97
Cdx1P18111 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC9.01□□□□□ -0.97
Cdx1P18111 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Cdx1P18111 CU062626.3-201ENSMUST00000225522 1411 ntBASIC9.01□□□□□ -0.97
Cdx1P18111 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Cdx1P18111 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC9.01□□□□□ -0.97
Cdx1P18111 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Cdx1P18111 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Cdx1P18111 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 Gtf2h3-201ENSMUST00000031333 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
Cdx1P18111 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 Gm18806-201ENSMUST00000207607 1775 ntBASIC9.01□□□□□ -0.97
Cdx1P18111 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 AC122197.2-201ENSMUST00000219196 1635 ntBASIC9.01□□□□□ -0.97
Cdx1P18111 AC154537.1-201ENSMUST00000226101 1304 ntBASIC9.01□□□□□ -0.97
Cdx1P18111 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 Sqor-202ENSMUST00000110506 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx1P18111 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Cdx1P18111 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cdx1P18111 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cdx1P18111 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC9□□□□□ -0.97
Cdx1P18111 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cdx1P18111 Fam161b-202ENSMUST00000065536 3000 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cdx1P18111 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC9□□□□□ -0.97
Cdx1P18111 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC9□□□□□ -0.97
Cdx1P18111 Park2-209ENSMUST00000191124 3202 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cdx1P18111 Car12-201ENSMUST00000071889 3716 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Cdx1P18111 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC9□□□□□ -0.97
Cdx1P18111 Gm42669-202ENSMUST00000160160 3080 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
Cdx1P18111 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cdx1P18111 Zfp512-201ENSMUST00000076264 3299 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cdx1P18111 Adh6-ps1-201ENSMUST00000171054 2789 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cdx1P18111 Gm16481-201ENSMUST00000119074 1227 ntBASIC9□□□□□ -0.97
Cdx1P18111 Gm15703-201ENSMUST00000120250 880 ntBASIC9□□□□□ -0.97
Cdx1P18111 Gm12176-201ENSMUST00000121420 875 ntBASIC9□□□□□ -0.97
Cdx1P18111 Gm5863-201ENSMUST00000121760 1008 ntBASIC9□□□□□ -0.97
Cdx1P18111 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cdx1P18111 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
Cdx1P18111 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC9□□□□□ -0.97
Cdx1P18111 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC9□□□□□ -0.97
Cdx1P18111 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC9□□□□□ -0.97
Cdx1P18111 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cdx1P18111 Gm10076-201ENSMUST00000073238 384 ntBASIC9□□□□□ -0.97
Cdx1P18111 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cdx1P18111 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Cdx1P18111 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cdx1P18111 Tex21-202ENSMUST00000218426 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Cdx1P18111 Mapkap1-203ENSMUST00000113126 3018 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Cdx1P18111 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cdx1P18111 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cdx1P18111 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cdx1P18111 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cdx1P18111 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Cdx1P18111 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cdx1P18111 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cdx1P18111 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC9□□□□□ -0.97
Cdx1P18111 4930451G09Rik-201ENSMUST00000090457 2206 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cdx1P18111 Eif4e1b-206ENSMUST00000132728 1897 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Cdx1P18111 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Cdx1P18111 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Cdx1P18111 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC9□□□□□ -0.97
Cdx1P18111 Gm6170-201ENSMUST00000187672 1388 ntBASIC8.99□□□□□ -0.97
Cdx1P18111 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cdx1P18111 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Cdx1P18111 Upp2-201ENSMUST00000059102 2498 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cdx1P18111 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cdx1P18111 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Cdx1P18111 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Cdx1P18111 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Cdx1P18111 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Cdx1P18111 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Cdx1P18111 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Cdx1P18111 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms