Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.41□□□□□ -0.58
CopeO89079 Gm12407-201ENSMUST00000180219 324 ntBASIC11.41□□□□□ -0.58
CopeO89079 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
CopeO89079 Gm7783-201ENSMUST00000204795 781 ntBASIC11.41□□□□□ -0.58
CopeO89079 Gm6082-201ENSMUST00000215204 454 ntBASIC11.41□□□□□ -0.58
CopeO89079 Gm18730-201ENSMUST00000218038 343 ntBASIC11.41□□□□□ -0.58
CopeO89079 AC154461.3-201ENSMUST00000224831 573 ntBASIC11.41□□□□□ -0.58
CopeO89079 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CopeO89079 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CopeO89079 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CopeO89079 Gm25125-201ENSMUST00000083340 136 ntBASIC11.41□□□□□ -0.58
CopeO89079 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
CopeO89079 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
CopeO89079 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CopeO89079 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CopeO89079 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CopeO89079 Hyal2-206ENSMUST00000195681 2968 ntBASIC11.41□□□□□ -0.58
CopeO89079 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CopeO89079 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC11.41□□□□□ -0.58
CopeO89079 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
CopeO89079 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CopeO89079 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CopeO89079 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.41□□□□□ -0.58
CopeO89079 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CopeO89079 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CopeO89079 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CopeO89079 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CopeO89079 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CopeO89079 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CopeO89079 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CopeO89079 Spata33-207ENSMUST00000212760 4074 ntBASIC11.4□□□□□ -0.58
CopeO89079 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CopeO89079 Gm45165-201ENSMUST00000207763 1631 ntBASIC11.4□□□□□ -0.58
CopeO89079 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC11.4□□□□□ -0.58
CopeO89079 Gm23061-201ENSMUST00000102348 116 ntBASIC11.4□□□□□ -0.58
CopeO89079 Gm24891-201ENSMUST00000104391 136 ntBASIC11.4□□□□□ -0.58
CopeO89079 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
CopeO89079 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CopeO89079 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CopeO89079 Gm8111-201ENSMUST00000117659 987 ntBASIC11.4□□□□□ -0.58
CopeO89079 Gm14127-201ENSMUST00000117906 678 ntBASIC11.4□□□□□ -0.58
CopeO89079 Gm15374-201ENSMUST00000119313 844 ntBASIC11.4□□□□□ -0.58
CopeO89079 Gm11941-201ENSMUST00000119904 610 ntBASIC11.4□□□□□ -0.58
CopeO89079 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.4□□□□□ -0.58
CopeO89079 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.4□□□□□ -0.58
CopeO89079 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
CopeO89079 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.4□□□□□ -0.58
CopeO89079 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CopeO89079 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CopeO89079 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
CopeO89079 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
CopeO89079 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
CopeO89079 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
CopeO89079 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CopeO89079 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.4□□□□□ -0.58
CopeO89079 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.4□□□□□ -0.58
CopeO89079 Gm17825-201ENSMUST00000206836 794 ntBASIC11.4□□□□□ -0.58
CopeO89079 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CopeO89079 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CopeO89079 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CopeO89079 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CopeO89079 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
CopeO89079 Gm21811-201ENSMUST00000096485 930 ntBASIC11.4□□□□□ -0.58
CopeO89079 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CopeO89079 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CopeO89079 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CopeO89079 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CopeO89079 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
CopeO89079 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
CopeO89079 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CopeO89079 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CopeO89079 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CopeO89079 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
CopeO89079 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
CopeO89079 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
CopeO89079 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.59
CopeO89079 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
CopeO89079 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.4□□□□□ -0.59
CopeO89079 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
CopeO89079 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CopeO89079 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
CopeO89079 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
CopeO89079 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CopeO89079 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CopeO89079 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.39□□□□□ -0.59
CopeO89079 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CopeO89079 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CopeO89079 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.39□□□□□ -0.59
CopeO89079 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CopeO89079 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
CopeO89079 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CopeO89079 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CopeO89079 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.39□□□□□ -0.59
CopeO89079 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.39□□□□□ -0.59
CopeO89079 Gm8199-201ENSMUST00000121323 823 ntBASIC11.39□□□□□ -0.59
CopeO89079 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.39□□□□□ -0.59
CopeO89079 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.39□□□□□ -0.59
CopeO89079 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.39□□□□□ -0.59
CopeO89079 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CopeO89079 Gm24990-201ENSMUST00000157406 323 ntBASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms