Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Itgb3O54890 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Itgb3O54890 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Itgb3O54890 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Itgb3O54890 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Itgb3O54890 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Itgb3O54890 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Itgb3O54890 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Itgb3O54890 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Itgb3O54890 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Itgb3O54890 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Itgb3O54890 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Itgb3O54890 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Itgb3O54890 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Itgb3O54890 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Itgb3O54890 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Itgb3O54890 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Itgb3O54890 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Itgb3O54890 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Itgb3O54890 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Itgb3O54890 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Itgb3O54890 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Itgb3O54890 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.75□□□□□ -0.53
Itgb3O54890 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Itgb3O54890 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Itgb3O54890 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.75□□□□□ -0.53
Itgb3O54890 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Itgb3O54890 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Itgb3O54890 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Itgb3O54890 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Itgb3O54890 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Itgb3O54890 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Itgb3O54890 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Itgb3O54890 Gm13351-201ENSMUST00000118087 414 ntBASIC11.75□□□□□ -0.53
Itgb3O54890 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC11.75□□□□□ -0.53
Itgb3O54890 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Itgb3O54890 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC11.75□□□□□ -0.53
Itgb3O54890 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC11.75□□□□□ -0.53
Itgb3O54890 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11.75□□□□□ -0.53
Itgb3O54890 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.75□□□□□ -0.53
Itgb3O54890 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Itgb3O54890 Gm3671-201ENSMUST00000182463 1007 ntBASIC11.75□□□□□ -0.53
Itgb3O54890 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.75□□□□□ -0.53
Itgb3O54890 Gm19927-201ENSMUST00000185792 781 ntBASIC11.75□□□□□ -0.53
Itgb3O54890 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.75□□□□□ -0.53
Itgb3O54890 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC11.75□□□□□ -0.53
Itgb3O54890 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC11.75□□□□□ -0.53
Itgb3O54890 Gm5298-201ENSMUST00000201122 892 ntBASIC11.75□□□□□ -0.53
Itgb3O54890 Gm43371-201ENSMUST00000202838 1031 ntBASIC11.75□□□□□ -0.53
Itgb3O54890 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Itgb3O54890 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Itgb3O54890 Gm8255-201ENSMUST00000218693 305 ntBASIC11.75□□□□□ -0.53
Itgb3O54890 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Itgb3O54890 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Itgb3O54890 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Itgb3O54890 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Itgb3O54890 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Itgb3O54890 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Itgb3O54890 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Itgb3O54890 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Itgb3O54890 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Itgb3O54890 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Itgb3O54890 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Itgb3O54890 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Itgb3O54890 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Itgb3O54890 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Itgb3O54890 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Itgb3O54890 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Itgb3O54890 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11.75□□□□□ -0.53
Itgb3O54890 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Itgb3O54890 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Itgb3O54890 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Itgb3O54890 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Itgb3O54890 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Itgb3O54890 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Itgb3O54890 AC090962.2-201ENSMUST00000225064 1801 ntBASIC11.74□□□□□ -0.53
Itgb3O54890 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Itgb3O54890 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.74□□□□□ -0.53
Itgb3O54890 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Itgb3O54890 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.74□□□□□ -0.53
Itgb3O54890 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Itgb3O54890 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Itgb3O54890 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Itgb3O54890 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Itgb3O54890 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Itgb3O54890 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Itgb3O54890 Gm13445-201ENSMUST00000121664 307 ntBASIC11.74□□□□□ -0.53
Itgb3O54890 Gm11675-201ENSMUST00000121873 832 ntBASIC11.74□□□□□ -0.53
Itgb3O54890 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Itgb3O54890 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC11.74□□□□□ -0.53
Itgb3O54890 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC11.74□□□□□ -0.53
Itgb3O54890 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Itgb3O54890 Gm24248-201ENSMUST00000157321 322 ntBASIC11.74□□□□□ -0.53
Itgb3O54890 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Itgb3O54890 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Itgb3O54890 Gm6771-201ENSMUST00000182716 1001 ntBASIC11.74□□□□□ -0.53
Itgb3O54890 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Itgb3O54890 Gm2594-201ENSMUST00000214774 742 ntBASIC11.74□□□□□ -0.53
Itgb3O54890 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Itgb3O54890 AC154435.1-201ENSMUST00000223938 959 ntBASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms